RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 RBM8AQ9Y5S9 174 aaKnown RBP19.23■□□□□ 0.67
PDZRN3-201ENST00000263666 CHRNA2Q15822 529 aa19.23■□□□□ 0.67
PDZRN3-201ENST00000263666 ZDHHC9Q9Y397 364 aa19.23■□□□□ 0.67
PDZRN3-201ENST00000263666 MEX3CQ5U5Q3 659 aaKnown RBP19.23■□□□□ 0.67
PDZRN3-201ENST00000263666 FAM227BQ96M60 508 aa19.23■□□□□ 0.67
PDZRN3-201ENST00000263666 SNX14Q9Y5W7 946 aa19.22■□□□□ 0.67
PDZRN3-201ENST00000263666 C19orf44Q9H6X5 657 aa19.22■□□□□ 0.67
PDZRN3-201ENST00000263666 HOXC9P31274 260 aa19.21■□□□□ 0.67
PDZRN3-201ENST00000263666 TPD52L1Q16890 204 aaPredicted RBP19.21■□□□□ 0.67
PDZRN3-201ENST00000263666 C16orf45Q96MC5 204 aaPredicted RBP19.21■□□□□ 0.67
PDZRN3-201ENST00000263666 DDX46Q7L014 1031 aaKnown RBP19.21■□□□□ 0.67
PDZRN3-201ENST00000263666 CCDC73Q6ZRK6 1079 aa19.21■□□□□ 0.67
PDZRN3-201ENST00000263666 ORAI2Q96SN7 254 aa19.21■□□□□ 0.67
PDZRN3-201ENST00000263666 SPDYE4A6NLX3 237 aa19.21■□□□□ 0.66
PDZRN3-201ENST00000263666 FKBP4Q02790 459 aaKnown RBP eCLIP19.21■□□□□ 0.66
PDZRN3-201ENST00000263666 CPLX1O14810 134 aa19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 BRD1O95696 1058 aa19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 F13A1P00488 732 aa19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 ME1P48163 572 aa19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 MAP3K11Q16584 847 aa19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 FLT4P35916 1363 aa19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 CABLES1Q8TDN4 633 aa19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 DBF4Q9UBU7 674 aaPredicted RBP19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 ATP2B1P20020 1258 aa19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 NMIQ13287 307 aaPredicted RBP19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 UBE3BQ7Z3V4 1068 aa19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
PDZRN3-201ENST00000263666 CHST3Q7LGC8 479 aa19.19■□□□□ 0.66
PDZRN3-201ENST00000263666 IGSF3O75054 1194 aa19.19■□□□□ 0.66
PDZRN3-201ENST00000263666 UBE2HP62256 183 aa19.19■□□□□ 0.66
PDZRN3-201ENST00000263666 PTH1RQ03431 593 aa19.19■□□□□ 0.66
PDZRN3-201ENST00000263666 PDCP20941 246 aa19.19■□□□□ 0.66
PDZRN3-201ENST00000263666 BRPF1P55201 1214 aaPredicted RBP19.19■□□□□ 0.66
PDZRN3-201ENST00000263666 ERC1Q8IUD2 1116 aa19.19■□□□□ 0.66
PDZRN3-201ENST00000263666 SNRKQ9NRH2 765 aa19.19■□□□□ 0.66
PDZRN3-201ENST00000263666 MYOM1P52179 1685 aa19.19■□□□□ 0.66
PDZRN3-201ENST00000263666 PDCL3Q9H2J4 239 aa19.18■□□□□ 0.66
PDZRN3-201ENST00000263666 NOL7Q9UMY1 257 aaKnown RBP19.18■□□□□ 0.66
PDZRN3-201ENST00000263666 PRAMEF22A3QJZ6 481 aa19.18■□□□□ 0.66
PDZRN3-201ENST00000263666 DACT1Q9NYF0 836 aa19.18■□□□□ 0.66
PDZRN3-201ENST00000263666 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 PPP1R9BQ96SB3 815 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 SETD1BQ9UPS6 1966 aaKnown RBP19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 SGSM2O43147 1006 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 ADCK5Q3MIX3 580 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 CCDC129Q6ZRS4 1044 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 LUZP1Q86V48 1076 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 ZHX1Q9UKY1 873 aaPredicted RBP19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 TTC21AQ8NDW8 1320 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 ANAPC15P60006 121 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 NOLC1Q14978 699 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 NBPF6Q5VWK0 638 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 NBPF4Q96M43 638 aa19.17■□□□□ 0.66
PDZRN3-201ENST00000263666 NRDCO43847 1150 aa19.16■□□□□ 0.66
PDZRN3-201ENST00000263666 ISM2Q6H9L7 571 aa19.16■□□□□ 0.66
PDZRN3-201ENST00000263666 IL25Q9H293 177 aa19.16■□□□□ 0.66
PDZRN3-201ENST00000263666 TRMT1Q9NXH9 659 aaKnown RBP19.16■□□□□ 0.66
PDZRN3-201ENST00000263666 MROH2AA6NES4 1674 aa19.16■□□□□ 0.66
PDZRN3-201ENST00000263666 ROBO2Q9HCK4 1378 aa19.16■□□□□ 0.66
PDZRN3-201ENST00000263666 LETM1O95202 739 aaPredicted RBP19.16■□□□□ 0.66
PDZRN3-201ENST00000263666 GTF2E1P29083 439 aaPredicted RBP19.16■□□□□ 0.66
PDZRN3-201ENST00000263666 HAND2P61296 217 aa19.16■□□□□ 0.66
PDZRN3-201ENST00000263666 PNPLA6Q8IY17 1366 aa19.15■□□□□ 0.66
PDZRN3-201ENST00000263666 KINO60870 393 aaKnown RBP19.15■□□□□ 0.66
PDZRN3-201ENST00000263666 LARGE1O95461 756 aa19.15■□□□□ 0.66
PDZRN3-201ENST00000263666 CCAR2Q8N163 923 aaKnown RBP19.15■□□□□ 0.66
PDZRN3-201ENST00000263666 KIF3AQ9Y496 699 aa19.15■□□□□ 0.66
PDZRN3-201ENST00000263666 BRF1Q92994 677 aa19.15■□□□□ 0.66
PDZRN3-201ENST00000263666 ZSCAN31Q96LW9 406 aaPredicted RBP19.15■□□□□ 0.66
PDZRN3-201ENST00000263666 PROSER3Q2NL68 480 aa19.14■□□□□ 0.66
PDZRN3-201ENST00000263666 COPS6Q7L5N1 327 aa19.14■□□□□ 0.65
PDZRN3-201ENST00000263666 SMC2O95347 1197 aa19.14■□□□□ 0.65
PDZRN3-201ENST00000263666 CABP4P57796 275 aa19.14■□□□□ 0.65
PDZRN3-201ENST00000263666 BICC1Q9H694 974 aaKnown RBP19.14■□□□□ 0.65
PDZRN3-201ENST00000263666 KAT6BQ8WYB5 2073 aa19.14■□□□□ 0.65
PDZRN3-201ENST00000263666 RUFY3Q7L099 469 aa19.14■□□□□ 0.65
PDZRN3-201ENST00000263666 HOMER1Q86YM7 354 aa19.14■□□□□ 0.65
PDZRN3-201ENST00000263666 XAGE3Q8WTP9 111 aa19.14■□□□□ 0.65
PDZRN3-201ENST00000263666 ERCC4Q92889 916 aaPredicted RBP19.14■□□□□ 0.65
PDZRN3-201ENST00000263666 BIN1O00499 593 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 HSP90AB3PQ58FF7 597 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 CREB3L3Q68CJ9 461 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 CCDC186Q7Z3E2 898 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 CHMP4CQ96CF2 233 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 EVI5LQ96CN4 794 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 ADGRB1O14514 1584 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 A0A087WZG4 1122 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 GOLIM4O00461 696 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 MAP3K5Q99683 1374 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 HSPA4P34932 840 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 ANO6Q4KMQ2 910 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 DNAJC25Q9H1X3 360 aa19.13■□□□□ 0.65
PDZRN3-201ENST00000263666 PTGS1P23219 599 aa19.12■□□□□ 0.65
PDZRN3-201ENST00000263666 FAM177A1Q8N128 213 aaPredicted RBP19.12■□□□□ 0.65
PDZRN3-201ENST00000263666 INTS4Q96HW7 963 aaKnown RBP19.12■□□□□ 0.65
PDZRN3-201ENST00000263666 DDIT3P35638 169 aa19.12■□□□□ 0.65
PDZRN3-201ENST00000263666 ZNF771Q7L3S4 317 aaPredicted RBP19.12■□□□□ 0.65
PDZRN3-201ENST00000263666 ARHGAP31Q2M1Z3 1444 aa19.12■□□□□ 0.65
PDZRN3-201ENST00000263666 ANKRD24Q8TF21 1146 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms