RNA–Protein interactions for RNA: ENST00000263228.3

UBE2R2-201, Transcript of ubiquitin conjugating enzyme E2 R2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2R2, Length 4,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2R2-201ENST00000263228 CEP57L1Q8IYX8 460 aa19.76■□□□□ 0.75
UBE2R2-201ENST00000263228 MYD88Q99836 296 aa19.76■□□□□ 0.75
UBE2R2-201ENST00000263228 PLEKHO1Q53GL0 409 aaPredicted RBP19.76■□□□□ 0.75
UBE2R2-201ENST00000263228 RBM8AQ9Y5S9 174 aaKnown RBP19.76■□□□□ 0.75
UBE2R2-201ENST00000263228 F13A1P00488 732 aa19.75■□□□□ 0.75
UBE2R2-201ENST00000263228 OLFM4Q6UX06 510 aa19.75■□□□□ 0.75
UBE2R2-201ENST00000263228 NPC1L1Q9UHC9 1359 aa19.75■□□□□ 0.75
UBE2R2-201ENST00000263228 KLHL10Q6JEL2 608 aa19.75■□□□□ 0.75
UBE2R2-201ENST00000263228 CPLX3Q8WVH0 158 aa19.75■□□□□ 0.75
UBE2R2-201ENST00000263228 CCDC34Q96HJ3 373 aa19.75■□□□□ 0.75
UBE2R2-201ENST00000263228 RAD21O60216 631 aa19.75■□□□□ 0.75
UBE2R2-201ENST00000263228 SLC39A6Q13433 755 aa19.75■□□□□ 0.75
UBE2R2-201ENST00000263228 FSIP1Q8NA03 581 aa19.75■□□□□ 0.75
UBE2R2-201ENST00000263228 SYNMO15061 1565 aa19.74■□□□□ 0.75
UBE2R2-201ENST00000263228 PTPRCP08575 1304 aa19.73■□□□□ 0.75
UBE2R2-201ENST00000263228 ERC1Q8IUD2 1116 aa19.73■□□□□ 0.75
UBE2R2-201ENST00000263228 UNC5CLQ8IV45 518 aa19.73■□□□□ 0.75
UBE2R2-201ENST00000263228 SCAND2PQ9GZW5 306 aaPredicted RBP19.73■□□□□ 0.75
UBE2R2-201ENST00000263228 CFAP45Q9UL16 551 aa19.73■□□□□ 0.75
UBE2R2-201ENST00000263228 ARAP3Q8WWN8 1544 aa19.73■□□□□ 0.75
UBE2R2-201ENST00000263228 POGZQ7Z3K3 1410 aa19.73■□□□□ 0.75
UBE2R2-201ENST00000263228 NUP133Q8WUM0 1156 aa19.73■□□□□ 0.75
UBE2R2-201ENST00000263228 UBXN4Q92575 508 aa19.73■□□□□ 0.75
UBE2R2-201ENST00000263228 ANKRD1Q15327 319 aa19.72■□□□□ 0.75
UBE2R2-201ENST00000263228 ZNF396Q96N95 335 aaPredicted RBP19.72■□□□□ 0.75
UBE2R2-201ENST00000263228 MADDQ8WXG6 1647 aa19.72■□□□□ 0.75
UBE2R2-201ENST00000263228 A0A087WWV3 80 aa19.72■□□□□ 0.75
UBE2R2-201ENST00000263228 TSR1Q2NL82 804 aaKnown RBP19.72■□□□□ 0.75
UBE2R2-201ENST00000263228 TMC6Q7Z403 805 aa19.72■□□□□ 0.75
UBE2R2-201ENST00000263228 ATP8B2P98198 1209 aa19.72■□□□□ 0.75
UBE2R2-201ENST00000263228 GOLIM4O00461 696 aa19.71■□□□□ 0.75
UBE2R2-201ENST00000263228 SFPQP23246 707 aaKnown RBP eCLIP19.71■□□□□ 0.753e-8■□□□□ 9.2
UBE2R2-201ENST00000263228 GTF2F1P35269 517 aaKnown RBP eCLIP19.71■□□□□ 0.759e-7■■■■■ 27.6
UBE2R2-201ENST00000263228 HSP90AB3PQ58FF7 597 aa19.71■□□□□ 0.75
UBE2R2-201ENST00000263228 PTPRTO14522 1441 aa19.71■□□□□ 0.75
UBE2R2-201ENST00000263228 TRPM2O94759 1503 aa19.71■□□□□ 0.75
UBE2R2-201ENST00000263228 PATL2C9JE40 543 aaKnown RBP19.71■□□□□ 0.75
UBE2R2-201ENST00000263228 ZNF445P59923 1031 aa19.71■□□□□ 0.75
UBE2R2-201ENST00000263228 TYRO3Q06418 890 aa19.71■□□□□ 0.75
UBE2R2-201ENST00000263228 UBE3BQ7Z3V4 1068 aa19.71■□□□□ 0.75
UBE2R2-201ENST00000263228 EDC3Q96F86 508 aaKnown RBP19.71■□□□□ 0.75
UBE2R2-201ENST00000263228 TPM1P09493 284 aa19.71■□□□□ 0.75
UBE2R2-201ENST00000263228 LRMPQ12912 555 aa19.7■□□□□ 0.74
UBE2R2-201ENST00000263228 SAFBQ15424 915 aaKnown RBP eCLIP19.7■□□□□ 0.74
UBE2R2-201ENST00000263228 RIOK3O14730 519 aaKnown RBP19.7■□□□□ 0.74
UBE2R2-201ENST00000263228 IDH1O75874 414 aaKnown RBP19.7■□□□□ 0.74
UBE2R2-201ENST00000263228 SKILP12757 684 aa19.7■□□□□ 0.74
UBE2R2-201ENST00000263228 CCAR1Q8IX12 1150 aaKnown RBP19.7■□□□□ 0.74
UBE2R2-201ENST00000263228 HIP1O00291 1037 aa19.7■□□□□ 0.74
UBE2R2-201ENST00000263228 KAT6BQ8WYB5 2073 aa19.69■□□□□ 0.74
UBE2R2-201ENST00000263228 NBPF7P0C2Y1 421 aaPredicted RBP19.69■□□□□ 0.74
UBE2R2-201ENST00000263228 MCM5P33992 734 aa19.69■□□□□ 0.74
UBE2R2-201ENST00000263228 RNF216Q9NWF9 866 aaPredicted RBP19.69■□□□□ 0.74
UBE2R2-201ENST00000263228 EVA1CP58658 441 aa19.69■□□□□ 0.74
UBE2R2-201ENST00000263228 KIF18AQ8NI77 898 aa19.69■□□□□ 0.74
UBE2R2-201ENST00000263228 LRRC59Q96AG4 307 aaKnown RBP19.69■□□□□ 0.74
UBE2R2-201ENST00000263228 LAMC1P11047 1609 aa19.69■□□□□ 0.74
UBE2R2-201ENST00000263228 CLTCL1P53675 1640 aa19.68■□□□□ 0.74
UBE2R2-201ENST00000263228 FAM193AP78312 1265 aa19.68■□□□□ 0.74
UBE2R2-201ENST00000263228 GPS2Q13227 327 aa19.68■□□□□ 0.74
UBE2R2-201ENST00000263228 NAP1L1P55209 391 aaKnown RBP19.68■□□□□ 0.74
UBE2R2-201ENST00000263228 NPATQ14207 1427 aa19.68■□□□□ 0.74
UBE2R2-201ENST00000263228 FAM227BQ96M60 508 aa19.68■□□□□ 0.74
UBE2R2-201ENST00000263228 FAM200AQ8TCP9 573 aa19.68■□□□□ 0.74
UBE2R2-201ENST00000263228 SH2B1Q9NRF2 756 aaPredicted RBP19.68■□□□□ 0.74
UBE2R2-201ENST00000263228 NMIQ13287 307 aaPredicted RBP19.67■□□□□ 0.74
UBE2R2-201ENST00000263228 CEP135Q66GS9 1140 aa19.67■□□□□ 0.74
UBE2R2-201ENST00000263228 STRN4Q9NRL3 753 aa19.67■□□□□ 0.74
UBE2R2-201ENST00000263228 PPIP5K1Q6PFW1 1433 aa19.67■□□□□ 0.74
UBE2R2-201ENST00000263228 MARCH6O60337 910 aa19.67■□□□□ 0.74
UBE2R2-201ENST00000263228 LMOD1P29536 600 aaPredicted RBP19.67■□□□□ 0.74
UBE2R2-201ENST00000263228 IL13P35225 146 aa19.67■□□□□ 0.74
UBE2R2-201ENST00000263228 HSP90B2PQ58FF3 399 aa19.67■□□□□ 0.74
UBE2R2-201ENST00000263228 CCDC129Q6ZRS4 1044 aa19.67■□□□□ 0.74
UBE2R2-201ENST00000263228 USP16Q9Y5T5 823 aa19.67■□□□□ 0.74
UBE2R2-201ENST00000263228 TTC39AQ5SRH9 613 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 VPS53Q5VIR6 699 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 EYA1Q99502 592 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 AMOTL2Q9Y2J4 779 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 MARCKSP29966 332 aaPredicted RBP19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 ABCA9Q8IUA7 1624 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 KDM5AP29375 1690 aaKnown RBP19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 OTUD7BQ6GQQ9 843 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 A0A087WZG4 1122 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 CCDC66A2RUB6 948 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 DHX16O60231 1041 aaKnown RBP19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 AOPEPQ8N6M6 819 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 PRIMPOLQ96LW4 560 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 PLEKHF1Q96S99 279 aa19.66■□□□□ 0.74
UBE2R2-201ENST00000263228 LARP1Q6PKG0 1096 aaKnown RBP19.65■□□□□ 0.74
UBE2R2-201ENST00000263228 ZBTB3Q9H5J0 574 aa19.65■□□□□ 0.74
UBE2R2-201ENST00000263228 NEK1Q96PY6 1258 aa19.64■□□□□ 0.74
UBE2R2-201ENST00000263228 SNX14Q9Y5W7 946 aa19.64■□□□□ 0.74
UBE2R2-201ENST00000263228 NSD2O96028 1365 aa19.64■□□□□ 0.73
UBE2R2-201ENST00000263228 IPO7O95373 1038 aaKnown RBP19.64■□□□□ 0.73
UBE2R2-201ENST00000263228 C8orf76Q96K31 380 aa19.64■□□□□ 0.73
UBE2R2-201ENST00000263228 CNNM1Q9NRU3 951 aa19.64■□□□□ 0.73
UBE2R2-201ENST00000263228 TTC21BQ7Z4L5 1316 aa19.64■□□□□ 0.73
UBE2R2-201ENST00000263228 ERICH2A1L162 156 aa19.64■□□□□ 0.73
UBE2R2-201ENST00000263228 IBSPP21815 317 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms