RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 CWF19L2Q2TBE0 894 aaKnown RBP27.32■■□□□ 1.96
MCF2L-201ENST00000261963 PDLIM2Q96JY6 352 aa27.32■■□□□ 1.96
MCF2L-201ENST00000261963 EPB41L2O43491 1005 aaKnown RBP27.32■■□□□ 1.96
MCF2L-201ENST00000261963 PODXL2Q9NZ53 605 aa27.32■■□□□ 1.96
MCF2L-201ENST00000261963 ALS2Q96Q42 1657 aa27.31■■□□□ 1.96
MCF2L-201ENST00000261963 NCLP19338 710 aaKnown RBP27.31■■□□□ 1.96
MCF2L-201ENST00000261963 ZSCAN23Q3MJ62 389 aa27.31■■□□□ 1.96
MCF2L-201ENST00000261963 HYPKQ9NX55 129 aa27.31■■□□□ 1.96
MCF2L-201ENST00000261963 C9orf78Q9NZ63 289 aaPredicted RBP27.31■■□□□ 1.96
MCF2L-201ENST00000261963 CUL4AQ13619 759 aa27.31■■□□□ 1.96
MCF2L-201ENST00000261963 CSPP1Q1MSJ5 1256 aa27.31■■□□□ 1.96
MCF2L-201ENST00000261963 CAVIN1Q6NZI2 390 aaKnown RBP27.31■■□□□ 1.96
MCF2L-201ENST00000261963 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.31■■□□□ 1.96
MCF2L-201ENST00000261963 PDIA6Q15084 440 aa27.3■■□□□ 1.96
MCF2L-201ENST00000261963 LMBRD1Q9NUN5 540 aa27.3■■□□□ 1.96
MCF2L-201ENST00000261963 SGSM2O43147 1006 aa27.3■■□□□ 1.96
MCF2L-201ENST00000261963 HSPA4P34932 840 aa27.3■■□□□ 1.96
MCF2L-201ENST00000261963 DYNC1I1O14576 645 aa27.29■■□□□ 1.96
MCF2L-201ENST00000261963 RBSNQ9H1K0 784 aa27.29■■□□□ 1.96
MCF2L-201ENST00000261963 SMAP1Q8IYB5 467 aaPredicted RBP27.29■■□□□ 1.96
MCF2L-201ENST00000261963 DDX21Q9NR30 783 aaKnown RBP eCLIP27.29■■□□□ 1.96
MCF2L-201ENST00000261963 KDM6AO15550 1401 aaPredicted RBP27.28■■□□□ 1.96
MCF2L-201ENST00000261963 OS9Q13438 667 aaPredicted RBP27.28■■□□□ 1.96
MCF2L-201ENST00000261963 CNTROBQ8N137 903 aa27.28■■□□□ 1.96
MCF2L-201ENST00000261963 UPF3BQ9BZI7 483 aaKnown RBP27.28■■□□□ 1.96
MCF2L-201ENST00000261963 LINS1Q8NG48 757 aa27.27■■□□□ 1.96
MCF2L-201ENST00000261963 DDX17Q92841 729 aaKnown RBP27.27■■□□□ 1.96
MCF2L-201ENST00000261963 PA2G4Q9UQ80 394 aaKnown RBP27.27■■□□□ 1.96
MCF2L-201ENST00000261963 ZKSCAN5Q9Y2L8 839 aa27.27■■□□□ 1.96
MCF2L-201ENST00000261963 TTC41PQ6P2S7 1318 aa27.27■■□□□ 1.96
MCF2L-201ENST00000261963 CRYBG1Q9Y4K1 1723 aa27.27■■□□□ 1.96
MCF2L-201ENST00000261963 MCM5P33992 734 aa27.27■■□□□ 1.96
MCF2L-201ENST00000261963 SLC39A6Q13433 755 aa27.27■■□□□ 1.96
MCF2L-201ENST00000261963 KAZALD1Q96I82 304 aa27.27■■□□□ 1.96
MCF2L-201ENST00000261963 RAD50Q92878 1312 aa27.26■■□□□ 1.96
MCF2L-201ENST00000261963 ZNF790Q6PG37 636 aa27.26■■□□□ 1.95
MCF2L-201ENST00000261963 RAPGEF4Q8WZA2 1011 aa27.26■■□□□ 1.95
MCF2L-201ENST00000261963 NLRP2Q9NX02 1062 aa27.26■■□□□ 1.95
MCF2L-201ENST00000261963 NPHP3Q7Z494 1330 aa27.26■■□□□ 1.95
MCF2L-201ENST00000261963 UTYO14607 1347 aa27.25■■□□□ 1.95
MCF2L-201ENST00000261963 SUCLG2Q96I99 432 aa27.25■■□□□ 1.95
MCF2L-201ENST00000261963 LSG1Q9H089 658 aaKnown RBP27.25■■□□□ 1.95
MCF2L-201ENST00000261963 SLC52A2Q9HAB3 445 aa27.25■■□□□ 1.95
MCF2L-201ENST00000261963 GRM8O00222 908 aa27.25■■□□□ 1.95
MCF2L-201ENST00000261963 GLRX3O76003 335 aaKnown RBP27.25■■□□□ 1.95
MCF2L-201ENST00000261963 NOL8Q76FK4 1167 aaKnown RBP27.25■■□□□ 1.95
MCF2L-201ENST00000261963 AIMP1Q12904 312 aaKnown RBP27.24■■□□□ 1.95
MCF2L-201ENST00000261963 CLASRPQ8N2M8 674 aaKnown RBP27.24■■□□□ 1.95
MCF2L-201ENST00000261963 INTS4Q96HW7 963 aaKnown RBP27.24■■□□□ 1.95
MCF2L-201ENST00000261963 PHKG2P15735 406 aa27.24■■□□□ 1.95
MCF2L-201ENST00000261963 CHAMP1Q96JM3 812 aa27.24■■□□□ 1.95
MCF2L-201ENST00000261963 MEGF6O75095 1541 aa27.23■■□□□ 1.95
MCF2L-201ENST00000261963 DDX58O95786 925 aaKnown RBP27.22■■□□□ 1.95
MCF2L-201ENST00000261963 PRIM1P49642 420 aaKnown RBP27.22■■□□□ 1.95
MCF2L-201ENST00000261963 HDAC5Q9UQL6 1122 aa27.22■■□□□ 1.95
MCF2L-201ENST00000261963 TMEM94Q12767 1356 aa27.22■■□□□ 1.95
MCF2L-201ENST00000261963 IGKV5-2P06315 115 aa27.21■■□□□ 1.95
MCF2L-201ENST00000261963 SASS6Q6UVJ0 657 aa27.21■■□□□ 1.95
MCF2L-201ENST00000261963 BRD1O95696 1058 aa27.21■■□□□ 1.95
MCF2L-201ENST00000261963 TATP17735 454 aaPredicted RBP27.21■■□□□ 1.95
MCF2L-201ENST00000261963 ATF3P18847 181 aa27.21■■□□□ 1.95
MCF2L-201ENST00000261963 ERC1Q8IUD2 1116 aa27.21■■□□□ 1.95
MCF2L-201ENST00000261963 NFATC2IPQ8NCF5 419 aa27.21■■□□□ 1.95
MCF2L-201ENST00000261963 BICC1Q9H694 974 aaKnown RBP27.21■■□□□ 1.95
MCF2L-201ENST00000261963 ECHDC1Q9NTX5 307 aa27.21■■□□□ 1.95
MCF2L-201ENST00000261963 PRPF40AO75400 957 aaKnown RBP27.2■■□□□ 1.95
MCF2L-201ENST00000261963 CWC27Q6UX04 472 aaKnown RBP27.2■■□□□ 1.95
MCF2L-201ENST00000261963 SNX14Q9Y5W7 946 aa27.2■■□□□ 1.95
MCF2L-201ENST00000261963 CCDC39Q9UFE4 941 aa27.2■■□□□ 1.94
MCF2L-201ENST00000261963 SCN11AQ9UI33 1791 aa27.2■■□□□ 1.94
MCF2L-201ENST00000261963 C5P01031 1676 aa27.19■■□□□ 1.94
MCF2L-201ENST00000261963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.19■■□□□ 1.94
MCF2L-201ENST00000261963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.19■■□□□ 1.94
MCF2L-201ENST00000261963 COL18A1P39060 1754 aa27.19■■□□□ 1.94
MCF2L-201ENST00000261963 FOXD4L5Q5VV16 416 aaPredicted RBP27.19■■□□□ 1.94
MCF2L-201ENST00000261963 RASEFQ8IZ41 740 aa27.19■■□□□ 1.94
MCF2L-201ENST00000261963 FOXD4L4Q8WXT5 416 aaPredicted RBP27.19■■□□□ 1.94
MCF2L-201ENST00000261963 SPG7Q9UQ90 795 aa27.19■■□□□ 1.94
MCF2L-201ENST00000261963 GPT2Q8TD30 523 aa27.18■■□□□ 1.94
MCF2L-201ENST00000261963 CABLES1Q8TDN4 633 aa27.18■■□□□ 1.94
MCF2L-201ENST00000261963 SASH1O94885 1247 aa27.18■■□□□ 1.94
MCF2L-201ENST00000261963 IFIT2P09913 472 aaKnown RBP27.17■■□□□ 1.94
MCF2L-201ENST00000261963 ZNF496Q96IT1 587 aaPredicted RBP27.17■■□□□ 1.94
MCF2L-201ENST00000261963 MYL6BP14649 208 aa27.17■■□□□ 1.94
MCF2L-201ENST00000261963 RIC3Q7Z5B4 369 aa27.17■■□□□ 1.94
MCF2L-201ENST00000261963 AACSQ86V21 672 aa27.16■■□□□ 1.94
MCF2L-201ENST00000261963 XAGE3Q8WTP9 111 aa27.16■■□□□ 1.94
MCF2L-201ENST00000261963 TTC14Q96N46 770 aa27.16■■□□□ 1.94
MCF2L-201ENST00000261963 DCCP43146 1447 aa27.16■■□□□ 1.94
MCF2L-201ENST00000261963 LARP1Q6PKG0 1096 aaKnown RBP27.16■■□□□ 1.94
MCF2L-201ENST00000261963 IFNL2Q8IZJ0 200 aa27.16■■□□□ 1.94
MCF2L-201ENST00000261963 ABCC6O95255 1503 aa27.15■■□□□ 1.94
MCF2L-201ENST00000261963 NEURL1BA8MQ27 555 aa27.15■■□□□ 1.94
MCF2L-201ENST00000261963 LRP10Q7Z4F1 713 aa27.15■■□□□ 1.94
MCF2L-201ENST00000261963 GPATCH3Q96I76 525 aa27.15■■□□□ 1.94
MCF2L-201ENST00000261963 ARID3AQ99856 593 aa27.15■■□□□ 1.94
MCF2L-201ENST00000261963 DIAPH3Q9NSV4 1193 aa27.15■■□□□ 1.94
MCF2L-201ENST00000261963 CYP27B1O15528 508 aa27.15■■□□□ 1.94
MCF2L-201ENST00000261963 CHRNA2Q15822 529 aa27.14■■□□□ 1.94
MCF2L-201ENST00000261963 LRSAM1Q6UWE0 723 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms