RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 PHF14O94880 888 aa16.19■□□□□ 0.18
VHL-201ENST00000256474 DRC7Q8IY82 874 aa16.19■□□□□ 0.18
VHL-201ENST00000256474 DNAJC2Q99543 621 aaKnown RBP16.19■□□□□ 0.18
VHL-201ENST00000256474 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
VHL-201ENST00000256474 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.19■□□□□ 0.18
VHL-201ENST00000256474 ZSCAN22P10073 491 aaPredicted RBP16.19■□□□□ 0.18
VHL-201ENST00000256474 CUL4AQ13619 759 aa16.19■□□□□ 0.18
VHL-201ENST00000256474 CKAP2LQ8IYA6 745 aa16.19■□□□□ 0.18
VHL-201ENST00000256474 LRRC2Q9BYS8 371 aa16.19■□□□□ 0.18
VHL-201ENST00000256474 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.19■□□□□ 0.18
VHL-201ENST00000256474 GLRX3O76003 335 aaKnown RBP16.18■□□□□ 0.18
VHL-201ENST00000256474 ADCY5O95622 1261 aa16.18■□□□□ 0.18
VHL-201ENST00000256474 TPM2P07951 284 aa16.18■□□□□ 0.18
VHL-201ENST00000256474 CSB-PGBD3P0DP91 1061 aa16.18■□□□□ 0.18
VHL-201ENST00000256474 COL9A3Q14050 684 aaPredicted RBP16.18■□□□□ 0.18
VHL-201ENST00000256474 TLR7Q9NYK1 1049 aaKnown RBP16.18■□□□□ 0.18
VHL-201ENST00000256474 NOL7Q9UMY1 257 aaKnown RBP16.18■□□□□ 0.18
VHL-201ENST00000256474 RRP9O43818 475 aaKnown RBP16.18■□□□□ 0.18
VHL-201ENST00000256474 ANAPC15P60006 121 aa16.18■□□□□ 0.18
VHL-201ENST00000256474 LARP1BQ659C4 914 aaKnown RBP16.18■□□□□ 0.18
VHL-201ENST00000256474 THEMISQ8N1K5 641 aaPredicted RBP16.18■□□□□ 0.18
VHL-201ENST00000256474 RUFY2Q8WXA3 655 aa16.18■□□□□ 0.18
VHL-201ENST00000256474 DDX11Q96FC9 970 aa16.18■□□□□ 0.18
VHL-201ENST00000256474 NLRP2Q9NX02 1062 aa16.18■□□□□ 0.18
VHL-201ENST00000256474 PTPRUQ92729 1446 aa16.17■□□□□ 0.18
VHL-201ENST00000256474 BEND3Q5T5X7 828 aa16.17■□□□□ 0.18
VHL-201ENST00000256474 SIRT1Q96EB6 747 aa16.17■□□□□ 0.18
VHL-201ENST00000256474 ECHDC1Q9NTX5 307 aa16.17■□□□□ 0.18
VHL-201ENST00000256474 SALL3Q9BXA9 1300 aa16.17■□□□□ 0.18
VHL-201ENST00000256474 ADAMTS13Q76LX8 1427 aa16.17■□□□□ 0.18
VHL-201ENST00000256474 CHGBP05060 677 aa16.17■□□□□ 0.18
VHL-201ENST00000256474 STAP2Q9UGK3 403 aa16.17■□□□□ 0.18
VHL-201ENST00000256474 RAD50Q92878 1312 aa16.17■□□□□ 0.18
VHL-201ENST00000256474 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
VHL-201ENST00000256474 ORAI2Q96SN7 254 aa16.16■□□□□ 0.18
VHL-201ENST00000256474 RBM8AQ9Y5S9 174 aaKnown RBP16.16■□□□□ 0.18
VHL-201ENST00000256474 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.16■□□□□ 0.18
VHL-201ENST00000256474 PLEKHO1Q53GL0 409 aaPredicted RBP16.16■□□□□ 0.18
VHL-201ENST00000256474 INTS4Q96HW7 963 aaKnown RBP16.16■□□□□ 0.18
VHL-201ENST00000256474 ATP5J2-PTCD1G3V325 749 aa16.16■□□□□ 0.18
VHL-201ENST00000256474 PTCD1O75127 700 aaKnown RBP16.16■□□□□ 0.18
VHL-201ENST00000256474 NMIQ13287 307 aaPredicted RBP16.16■□□□□ 0.18
VHL-201ENST00000256474 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.16■□□□□ 0.18
VHL-201ENST00000256474 F13A1P00488 732 aa16.15■□□□□ 0.18
VHL-201ENST00000256474 HSP90AB4PQ58FF6 505 aa16.15■□□□□ 0.18
VHL-201ENST00000256474 BICC1Q9H694 974 aaKnown RBP16.15■□□□□ 0.18
VHL-201ENST00000256474 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
VHL-201ENST00000256474 CCDC183Q5T5S1 534 aa16.14■□□□□ 0.17
VHL-201ENST00000256474 SUCLG2Q96I99 432 aa16.14■□□□□ 0.17
VHL-201ENST00000256474 TAF6LQ9Y6J9 622 aa16.14■□□□□ 0.17
VHL-201ENST00000256474 MYD88Q99836 296 aa16.14■□□□□ 0.17
VHL-201ENST00000256474 A0A0U1RQG5 324 aaPredicted RBP16.14■□□□□ 0.17
VHL-201ENST00000256474 ME3Q16798 604 aa16.14■□□□□ 0.17
VHL-201ENST00000256474 NEUROD6Q96NK8 337 aa16.14■□□□□ 0.17
VHL-201ENST00000256474 KDM4AO75164 1064 aa16.13■□□□□ 0.17
VHL-201ENST00000256474 CCDC129Q6ZRS4 1044 aa16.13■□□□□ 0.17
VHL-201ENST00000256474 EAF2Q96CJ1 260 aaPredicted RBP16.13■□□□□ 0.17
VHL-201ENST00000256474 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
VHL-201ENST00000256474 HTATSF1O43719 755 aaKnown RBP16.13■□□□□ 0.17
VHL-201ENST00000256474 BICD2Q8TD16 824 aa16.13■□□□□ 0.17
VHL-201ENST00000256474 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
VHL-201ENST00000256474 PRDM10Q9NQV6 1147 aa16.12■□□□□ 0.17
VHL-201ENST00000256474 TBX22Q9Y458 520 aa16.12■□□□□ 0.17
VHL-201ENST00000256474 ATP6V1DQ9Y5K8 247 aa16.12■□□□□ 0.17
VHL-201ENST00000256474 CCDC85AQ96PX6 553 aaPredicted RBP16.12■□□□□ 0.17
VHL-201ENST00000256474 ZMYND15Q9H091 742 aa16.12■□□□□ 0.17
VHL-201ENST00000256474 BLOC1S2Q6QNY1 142 aa16.12■□□□□ 0.17
VHL-201ENST00000256474 RIMBP3CA6NJZ7 1639 aa16.12■□□□□ 0.17
VHL-201ENST00000256474 RIMBP3BA6NNM3 1639 aa16.12■□□□□ 0.17
VHL-201ENST00000256474 RIMBP3Q9UFD9 1639 aa16.12■□□□□ 0.17
VHL-201ENST00000256474 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 ANKRD24Q8TF21 1146 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 PDLIM2Q96JY6 352 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 A0A0D9SFI3 127 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 CREB3L3Q68CJ9 461 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 IP6K1Q92551 441 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 TPCN1Q9ULQ1 816 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 UBE2HP62256 183 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 HYPKQ9NX55 129 aa16.11■□□□□ 0.17
VHL-201ENST00000256474 H3BQV1 296 aa16.1■□□□□ 0.17
VHL-201ENST00000256474 GUCY1B3Q02153 619 aa16.1■□□□□ 0.17
VHL-201ENST00000256474 POLA2Q14181 598 aa16.1■□□□□ 0.17
VHL-201ENST00000256474 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
VHL-201ENST00000256474 DDX46Q7L014 1031 aaKnown RBP16.1■□□□□ 0.17
VHL-201ENST00000256474 PKNOX2Q96KN3 472 aa16.1■□□□□ 0.17
VHL-201ENST00000256474 SEC62Q99442 399 aaKnown RBP16.1■□□□□ 0.17
VHL-201ENST00000256474 SPATA31D1Q6ZQQ2 1576 aa16.1■□□□□ 0.17
VHL-201ENST00000256474 KDRP35968 1356 aa16.1■□□□□ 0.17
VHL-201ENST00000256474 GRM8O00222 908 aa16.1■□□□□ 0.17
VHL-201ENST00000256474 COPS6Q7L5N1 327 aa16.1■□□□□ 0.17
VHL-201ENST00000256474 CABLES1Q8TDN4 633 aa16.1■□□□□ 0.17
VHL-201ENST00000256474 RNMTO43148 476 aaKnown RBP16.09■□□□□ 0.17
VHL-201ENST00000256474 UBE3BQ7Z3V4 1068 aa16.09■□□□□ 0.17
VHL-201ENST00000256474 NFATC2IPQ8NCF5 419 aa16.09■□□□□ 0.17
VHL-201ENST00000256474 PEAK1Q9H792 1746 aa16.09■□□□□ 0.17
VHL-201ENST00000256474 RPAP1Q9BWH6 1393 aaPredicted RBP16.09■□□□□ 0.17
VHL-201ENST00000256474 PLEKHG1Q9ULL1 1385 aa16.09■□□□□ 0.17
VHL-201ENST00000256474 DDX58O95786 925 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms