RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 NUCB1Q02818 461 aa23.35■■□□□ 1.33
TNFSF9-201ENST00000245817 CWF19L2Q2TBE0 894 aaKnown RBP23.35■■□□□ 1.33
TNFSF9-201ENST00000245817 ANKRD45Q5TZF3 282 aa23.35■■□□□ 1.33
TNFSF9-201ENST00000245817 NPM2Q86SE8 214 aaKnown RBP23.35■■□□□ 1.33
TNFSF9-201ENST00000245817 DCTPP1Q9H773 170 aa23.35■■□□□ 1.33
TNFSF9-201ENST00000245817 ZNF330Q9Y3S2 320 aaPredicted RBP23.35■■□□□ 1.33
TNFSF9-201ENST00000245817 ATP8B2P98198 1209 aa23.35■■□□□ 1.33
TNFSF9-201ENST00000245817 KCNQ2O43526 872 aa23.34■■□□□ 1.33
TNFSF9-201ENST00000245817 NBPF7P0C2Y1 421 aaPredicted RBP23.34■■□□□ 1.33
TNFSF9-201ENST00000245817 CHD1LQ86WJ1 897 aa23.34■■□□□ 1.33
TNFSF9-201ENST00000245817 CYP19A1P11511 503 aaPredicted RBP23.33■■□□□ 1.33
TNFSF9-201ENST00000245817 ATP6V1AP38606 617 aa23.33■■□□□ 1.33
TNFSF9-201ENST00000245817 LOC102724428A0A0B4J2F2 783 aa23.32■■□□□ 1.32
TNFSF9-201ENST00000245817 GRM8O00222 908 aa23.32■■□□□ 1.32
TNFSF9-201ENST00000245817 SIK1P57059 783 aa23.32■■□□□ 1.32
TNFSF9-201ENST00000245817 KIF6Q6ZMV9 814 aa23.32■■□□□ 1.32
TNFSF9-201ENST00000245817 SLC4A9Q96Q91 983 aa23.32■■□□□ 1.32
TNFSF9-201ENST00000245817 NEURL1BA8MQ27 555 aa23.32■■□□□ 1.32
TNFSF9-201ENST00000245817 IGKV5-2P06315 115 aa23.32■■□□□ 1.32
TNFSF9-201ENST00000245817 TTLL7Q6ZT98 887 aa23.32■■□□□ 1.32
TNFSF9-201ENST00000245817 PALLDQ8WX93 1383 aa23.31■■□□□ 1.32
TNFSF9-201ENST00000245817 ARXQ96QS3 562 aa23.31■■□□□ 1.32
TNFSF9-201ENST00000245817 LNPKQ9C0E8 428 aa23.31■■□□□ 1.32
TNFSF9-201ENST00000245817 IBTKQ9P2D0 1353 aaPredicted RBP23.3■■□□□ 1.32
TNFSF9-201ENST00000245817 EP400Q96L91 3159 aa23.3■■□□□ 1.32
TNFSF9-201ENST00000245817 GCKRQ14397 625 aa23.29■■□□□ 1.32
TNFSF9-201ENST00000245817 ZBTB3Q9H5J0 574 aa23.29■■□□□ 1.32
TNFSF9-201ENST00000245817 UTYO14607 1347 aa23.28■■□□□ 1.32
TNFSF9-201ENST00000245817 PDE4AP27815 886 aa23.28■■□□□ 1.32
TNFSF9-201ENST00000245817 PNMA6EA0A0J9YXQ4 647 aa23.27■■□□□ 1.32
TNFSF9-201ENST00000245817 ATP5J2-PTCD1G3V325 749 aa23.27■■□□□ 1.32
TNFSF9-201ENST00000245817 PPP1R42Q7Z4L9 355 aa23.27■■□□□ 1.32
TNFSF9-201ENST00000245817 ZBTB1Q9Y2K1 713 aa23.26■■□□□ 1.31
TNFSF9-201ENST00000245817 SRGAP3O43295 1099 aa23.25■■□□□ 1.31
TNFSF9-201ENST00000245817 IL6STP40189 918 aaPredicted RBP23.25■■□□□ 1.31
TNFSF9-201ENST00000245817 ILDR2Q71H61 639 aa23.25■■□□□ 1.31
TNFSF9-201ENST00000245817 CCDC87Q9NVE4 849 aa23.25■■□□□ 1.31
TNFSF9-201ENST00000245817 FAM161AQ3B820 660 aa23.25■■□□□ 1.31
TNFSF9-201ENST00000245817 SSH3Q8TE77 659 aa23.25■■□□□ 1.31
TNFSF9-201ENST00000245817 RBM19Q9Y4C8 960 aaKnown RBP23.25■■□□□ 1.31
TNFSF9-201ENST00000245817 A0A087WZG4 1122 aa23.24■■□□□ 1.31
TNFSF9-201ENST00000245817 APBB1O00213 710 aa23.24■■□□□ 1.31
TNFSF9-201ENST00000245817 CWC25Q9NXE8 425 aaPredicted RBP23.24■■□□□ 1.31
TNFSF9-201ENST00000245817 SBF2Q86WG5 1849 aa23.23■■□□□ 1.31
TNFSF9-201ENST00000245817 TRIM37O94972 964 aa23.23■■□□□ 1.31
TNFSF9-201ENST00000245817 CRKLP46109 303 aaKnown RBP23.23■■□□□ 1.31
TNFSF9-201ENST00000245817 CCDC191Q8NCU4 936 aa23.23■■□□□ 1.31
TNFSF9-201ENST00000245817 BACH2Q9BYV9 841 aa23.23■■□□□ 1.31
TNFSF9-201ENST00000245817 MAP3K15Q6ZN16 1313 aa23.23■■□□□ 1.31
TNFSF9-201ENST00000245817 POLA2Q14181 598 aa23.22■■□□□ 1.31
TNFSF9-201ENST00000245817 SUCLG2Q96I99 432 aa23.22■■□□□ 1.31
TNFSF9-201ENST00000245817 BCL11BQ9C0K0 894 aaPredicted RBP23.22■■□□□ 1.31
TNFSF9-201ENST00000245817 TCIRG1Q13488 830 aa23.22■■□□□ 1.31
TNFSF9-201ENST00000245817 MTX1Q13505 466 aa23.22■■□□□ 1.31
TNFSF9-201ENST00000245817 ITPK1Q13572 414 aa23.22■■□□□ 1.31
TNFSF9-201ENST00000245817 HSP90AB3PQ58FF7 597 aa23.22■■□□□ 1.31
TNFSF9-201ENST00000245817 BCL11AQ9H165 835 aa23.22■■□□□ 1.31
TNFSF9-201ENST00000245817 EXOC6BQ9Y2D4 811 aa23.22■■□□□ 1.31
TNFSF9-201ENST00000245817 ARFGEF2Q9Y6D5 1785 aa23.22■■□□□ 1.31
TNFSF9-201ENST00000245817 HSP90AB4PQ58FF6 505 aa23.21■■□□□ 1.31
TNFSF9-201ENST00000245817 SURF6O75683 361 aaKnown RBP23.2■■□□□ 1.3
TNFSF9-201ENST00000245817 INTS5Q6P9B9 1019 aaKnown RBP23.2■■□□□ 1.3
TNFSF9-201ENST00000245817 UBE3BQ7Z3V4 1068 aa23.2■■□□□ 1.3
TNFSF9-201ENST00000245817 DZIP3Q86Y13 1208 aaKnown RBP23.2■■□□□ 1.3
TNFSF9-201ENST00000245817 LRRCC1Q9C099 1032 aa23.2■■□□□ 1.3
TNFSF9-201ENST00000245817 BICC1Q9H694 974 aaKnown RBP23.2■■□□□ 1.3
TNFSF9-201ENST00000245817 TJP1Q07157 1748 aa23.2■■□□□ 1.3
TNFSF9-201ENST00000245817 RAB11FIP3O75154 756 aa23.19■■□□□ 1.3
TNFSF9-201ENST00000245817 GIGYF2Q6Y7W6 1299 aaKnown RBP23.19■■□□□ 1.3
TNFSF9-201ENST00000245817 ERVV-1B6SEH8 477 aa23.19■■□□□ 1.3
TNFSF9-201ENST00000245817 EIF5P55010 431 aaKnown RBP23.18■■□□□ 1.3
TNFSF9-201ENST00000245817 PTF1AQ7RTS3 328 aa23.18■■□□□ 1.3
TNFSF9-201ENST00000245817 ISCA1Q9BUE6 129 aa23.18■■□□□ 1.3
TNFSF9-201ENST00000245817 NHSQ6T4R5 1651 aa23.17■■□□□ 1.3
TNFSF9-201ENST00000245817 H7C1W4 665 aa23.17■■□□□ 1.3
TNFSF9-201ENST00000245817 TRIM28Q13263 835 aaKnown RBP23.17■■□□□ 1.3
TNFSF9-201ENST00000245817 TBC1D2BQ9UPU7 963 aa23.17■■□□□ 1.3
TNFSF9-201ENST00000245817 SMARCA5O60264 1052 aaPredicted RBP23.16■■□□□ 1.3
TNFSF9-201ENST00000245817 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
TNFSF9-201ENST00000245817 JARID2Q92833 1246 aaPredicted RBP23.16■■□□□ 1.3
TNFSF9-201ENST00000245817 SF3B2Q13435 895 aaKnown RBP23.16■■□□□ 1.3
TNFSF9-201ENST00000245817 KAZALD1Q96I82 304 aa23.16■■□□□ 1.3
TNFSF9-201ENST00000245817 NUP188Q5SRE5 1749 aa23.15■■□□□ 1.3
TNFSF9-201ENST00000245817 COL15A1P39059 1388 aa23.15■■□□□ 1.3
TNFSF9-201ENST00000245817 C8orf34Q49A92 452 aa23.15■■□□□ 1.3
TNFSF9-201ENST00000245817 CCDC125Q86Z20 511 aa23.15■■□□□ 1.3
TNFSF9-201ENST00000245817 CCNL1Q9UK58 526 aaPredicted RBP23.15■■□□□ 1.3
TNFSF9-201ENST00000245817 HLFQ16534 295 aa23.14■■□□□ 1.29
TNFSF9-201ENST00000245817 LINC00116Q8NCU8 138 aa23.14■■□□□ 1.29
TNFSF9-201ENST00000245817 AFDNP55196 1824 aaKnown RBP23.14■■□□□ 1.29
TNFSF9-201ENST00000245817 APBA3O96018 575 aa23.13■■□□□ 1.29
TNFSF9-201ENST00000245817 KIF1BPQ96EK5 621 aa23.13■■□□□ 1.29
TNFSF9-201ENST00000245817 CICQ96RK0 1608 aaPredicted RBP23.13■■□□□ 1.29
TNFSF9-201ENST00000245817 CASP7P55210 303 aa23.13■■□□□ 1.29
TNFSF9-201ENST00000245817 ERC1Q8IUD2 1116 aa23.13■■□□□ 1.29
TNFSF9-201ENST00000245817 PLEKHM2Q8IWE5 1019 aa23.13■■□□□ 1.29
TNFSF9-201ENST00000245817 C16orf71Q8IYS4 520 aaPredicted RBP23.13■■□□□ 1.29
TNFSF9-201ENST00000245817 NOP58Q9Y2X3 529 aaKnown RBP23.13■■□□□ 1.29
TNFSF9-201ENST00000245817 RTL5Q5HYW3 569 aaPredicted RBP23.12■■□□□ 1.29
TNFSF9-201ENST00000245817 BTAF1O14981 1849 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms