RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 CCDC150Q8NCX0 1101 aa13.25□□□□□ -0.29
NIN-201ENST00000245441 EHBP1Q8NDI1 1231 aa13.25□□□□□ -0.29
NIN-201ENST00000245441 HDAC1Q13547 482 aaPredicted RBP13.25□□□□□ -0.29
NIN-201ENST00000245441 MICALCLQ6ZW33 695 aa13.25□□□□□ -0.29
NIN-201ENST00000245441 DNAI2Q9GZS0 605 aa13.25□□□□□ -0.29
NIN-201ENST00000245441 PIK3R4Q99570 1358 aa13.25□□□□□ -0.29
NIN-201ENST00000245441 SSR1P43307 286 aaKnown RBP13.25□□□□□ -0.29
NIN-201ENST00000245441 MAP2K1Q02750 393 aaPredicted RBP13.25□□□□□ -0.29
NIN-201ENST00000245441 TTC22Q5TAA0 569 aa13.25□□□□□ -0.29
NIN-201ENST00000245441 MKNK2Q9HBH9 465 aa13.25□□□□□ -0.29
NIN-201ENST00000245441 GJB2P29033 226 aa13.25□□□□□ -0.29
NIN-201ENST00000245441 IFFO1Q0D2I5 559 aa13.25□□□□□ -0.29
NIN-201ENST00000245441 TTF1Q15361 905 aaPredicted RBP13.24□□□□□ -0.29
NIN-201ENST00000245441 CCDC85AQ96PX6 553 aaPredicted RBP13.24□□□□□ -0.29
NIN-201ENST00000245441 TAOK3Q9H2K8 898 aa13.24□□□□□ -0.29
NIN-201ENST00000245441 CBX1P83916 185 aa13.24□□□□□ -0.29
NIN-201ENST00000245441 SNW1Q13573 536 aaKnown RBP13.24□□□□□ -0.29
NIN-201ENST00000245441 ANKRD36BQ8N2N9 1353 aa13.24□□□□□ -0.29
NIN-201ENST00000245441 GCOM1H8Y6P7 765 aaPredicted RBP13.24□□□□□ -0.29
NIN-201ENST00000245441 MYZAPP0CAP1 466 aa13.24□□□□□ -0.29
NIN-201ENST00000245441 SLC5A1P13866 664 aa13.24□□□□□ -0.29
NIN-201ENST00000245441 CCDC194A0A1B0GVG4 234 aa13.23□□□□□ -0.29
NIN-201ENST00000245441 NUCB1Q02818 461 aa13.23□□□□□ -0.29
NIN-201ENST00000245441 TMOD3Q9NYL9 352 aa13.23□□□□□ -0.29
NIN-201ENST00000245441 FAM114A1Q8IWE2 563 aa13.23□□□□□ -0.29
NIN-201ENST00000245441 CCDC12Q8WUD4 166 aaPredicted RBP13.23□□□□□ -0.29
NIN-201ENST00000245441 KIF5BP33176 963 aa13.23□□□□□ -0.29
NIN-201ENST00000245441 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
NIN-201ENST00000245441 ZSCAN23Q3MJ62 389 aa13.23□□□□□ -0.29
NIN-201ENST00000245441 DZIP1Q86YF9 867 aaKnown RBP13.23□□□□□ -0.29
NIN-201ENST00000245441 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
NIN-201ENST00000245441 TMOD2Q9NZR1 351 aa13.23□□□□□ -0.29
NIN-201ENST00000245441 CCDC171Q6TFL3 1326 aa13.22□□□□□ -0.29
NIN-201ENST00000245441 F6X3S4 739 aa13.22□□□□□ -0.29
NIN-201ENST00000245441 TMC6Q7Z403 805 aa13.22□□□□□ -0.29
NIN-201ENST00000245441 CETN1Q12798 172 aa13.22□□□□□ -0.29
NIN-201ENST00000245441 AMPD3Q01432 767 aa13.22□□□□□ -0.29
NIN-201ENST00000245441 GSTTP1A0A1W2PQM5 241 aa13.22□□□□□ -0.29
NIN-201ENST00000245441 PRKCSHP14314 528 aaPredicted RBP13.22□□□□□ -0.29
NIN-201ENST00000245441 GIMAP7Q8NHV1 300 aa13.22□□□□□ -0.29
NIN-201ENST00000245441 GRIN2AQ12879 1464 aa13.22□□□□□ -0.29
NIN-201ENST00000245441 MYD88Q99836 296 aa13.22□□□□□ -0.29
NIN-201ENST00000245441 TRMT1Q9NXH9 659 aaKnown RBP13.22□□□□□ -0.29
NIN-201ENST00000245441 CCDC178Q5BJE1 867 aa13.22□□□□□ -0.29
NIN-201ENST00000245441 IFIT3O14879 490 aaKnown RBP13.21□□□□□ -0.29
NIN-201ENST00000245441 TCP11L1Q9NUJ3 509 aa13.21□□□□□ -0.29
NIN-201ENST00000245441 POLR3DP05423 398 aaPredicted RBP13.21□□□□□ -0.29
NIN-201ENST00000245441 ARHGAP45Q92619 1136 aa13.21□□□□□ -0.29
NIN-201ENST00000245441 ANAPC15P60006 121 aa13.21□□□□□ -0.29
NIN-201ENST00000245441 CCDC113Q9H0I3 377 aa13.21□□□□□ -0.29
NIN-201ENST00000245441 ANKIB1Q9P2G1 1089 aa13.21□□□□□ -0.29
NIN-201ENST00000245441 RANBP6O60518 1105 aaKnown RBP13.21□□□□□ -0.29
NIN-201ENST00000245441 DISP3Q9P2K9 1392 aa13.21□□□□□ -0.29
NIN-201ENST00000245441 CTR9Q6PD62 1173 aa13.21□□□□□ -0.29
NIN-201ENST00000245441 LRSAM1Q6UWE0 723 aa13.21□□□□□ -0.29
NIN-201ENST00000245441 SLF2Q8IX21 1173 aa13.21□□□□□ -0.29
NIN-201ENST00000245441 DUOX2Q9NRD8 1548 aa13.21□□□□□ -0.3
NIN-201ENST00000245441 CCT2P78371 535 aaKnown RBP13.21□□□□□ -0.3
NIN-201ENST00000245441 CEP135Q66GS9 1140 aa13.21□□□□□ -0.3
NIN-201ENST00000245441 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.21□□□□□ -0.3
NIN-201ENST00000245441 GOLGA6L10A0A0M3HER8 536 aa13.21□□□□□ -0.3
NIN-201ENST00000245441 PTCD1O75127 700 aaKnown RBP13.21□□□□□ -0.3
NIN-201ENST00000245441 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.3
NIN-201ENST00000245441 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
NIN-201ENST00000245441 ADGBQ8N7X0 1667 aa13.2□□□□□ -0.3
NIN-201ENST00000245441 WAPLQ7Z5K2 1190 aa13.2□□□□□ -0.3
NIN-201ENST00000245441 ZPR1O75312 459 aa13.2□□□□□ -0.3
NIN-201ENST00000245441 GUCY1B3Q02153 619 aa13.2□□□□□ -0.3
NIN-201ENST00000245441 TDRD12Q587J7 1177 aaKnown RBP13.2□□□□□ -0.3
NIN-201ENST00000245441 PPP4R3AQ6IN85 833 aa13.2□□□□□ -0.3
NIN-201ENST00000245441 GDPD2Q9HCC8 539 aa13.2□□□□□ -0.3
NIN-201ENST00000245441 CCDC102BQ68D86 513 aa13.2□□□□□ -0.3
NIN-201ENST00000245441 GOLGA8AA7E2F4 631 aa13.2□□□□□ -0.3
NIN-201ENST00000245441 WASLO00401 505 aaPredicted RBP13.2□□□□□ -0.3
NIN-201ENST00000245441 HOOK3Q86VS8 718 aa13.2□□□□□ -0.3
NIN-201ENST00000245441 SMARCC1Q92922 1105 aaPredicted RBP13.2□□□□□ -0.3
NIN-201ENST00000245441 CCDC8Q9H0W5 538 aaPredicted RBP13.2□□□□□ -0.3
NIN-201ENST00000245441 CD109Q6YHK3 1445 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 CCDC175P0C221 793 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 GOPCQ9HD26 462 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 MAPKBP1O60336 1514 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 UGGT2Q9NYU1 1516 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 NOS1P29475 1434 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 HCLS1P14317 486 aaPredicted RBP13.19□□□□□ -0.3
NIN-201ENST00000245441 NME9Q86XW9 330 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 ANKRD18BA2A2Z9 1011 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 POLR3GO15318 223 aaPredicted RBP13.19□□□□□ -0.3
NIN-201ENST00000245441 ZSCAN22P10073 491 aaPredicted RBP13.19□□□□□ -0.3
NIN-201ENST00000245441 IARSP41252 1262 aaKnown RBP13.19□□□□□ -0.3
NIN-201ENST00000245441 ZC3H6P61129 1189 aaKnown RBP13.19□□□□□ -0.3
NIN-201ENST00000245441 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 KCNG4Q8TDN1 519 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 NEBLO76041 1014 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 MTIF2P46199 727 aaKnown RBP13.19□□□□□ -0.3
NIN-201ENST00000245441 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
NIN-201ENST00000245441 NUP160Q12769 1436 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 PEG3Q9GZU2 1588 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 METAP2P50579 478 aaKnown RBP eCLIP13.18□□□□□ -0.3
NIN-201ENST00000245441 HLTFQ14527 1009 aaKnown RBP eCLIP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms