RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.53□□□□□ -0.56
TUBB1-201ENST00000217133 AP5Z1O43299 807 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 MAP3K11Q16584 847 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 RUFY3Q7L099 469 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 CCDC186Q7Z3E2 898 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 NUP62CLQ9H1M0 184 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 SPG7Q9UQ90 795 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 EPB41L2O43491 1005 aaKnown RBP11.52□□□□□ -0.56
TUBB1-201ENST00000217133 SGSM2O43147 1006 aa11.52□□□□□ -0.57
TUBB1-201ENST00000217133 RASEFQ8IZ41 740 aa11.52□□□□□ -0.57
TUBB1-201ENST00000217133 FEZ1Q99689 392 aa11.52□□□□□ -0.57
TUBB1-201ENST00000217133 DLC1Q96QB1 1528 aa11.52□□□□□ -0.57
TUBB1-201ENST00000217133 KCNJ4P48050 445 aa11.52□□□□□ -0.57
TUBB1-201ENST00000217133 OS9Q13438 667 aaPredicted RBP11.52□□□□□ -0.57
TUBB1-201ENST00000217133 CCDC30Q5VVM6 783 aa11.52□□□□□ -0.57
TUBB1-201ENST00000217133 FUCA2Q9BTY2 467 aa11.52□□□□□ -0.57
TUBB1-201ENST00000217133 BCL11BQ9C0K0 894 aaPredicted RBP11.52□□□□□ -0.57
TUBB1-201ENST00000217133 KRT85P78386 507 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 FERMT3Q86UX7 667 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 LUZP1Q86V48 1076 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 ANKRD7Q92527 254 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 ZNF592Q92610 1267 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 JAKMIP1Q96N16 626 aaKnown RBP11.51□□□□□ -0.57
TUBB1-201ENST00000217133 PDRG1Q9NUG6 133 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 TNNT1P13805 278 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 ATF3P18847 181 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 HSP90AB2PQ58FF8 381 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 CKAP2LQ8IYA6 745 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 CCDC112Q8NEF3 446 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 MTMR6Q9Y217 621 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 AOX1Q06278 1338 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 TTC14Q96N46 770 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 TNMDQ9H2S6 317 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 C19orf44Q9H6X5 657 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 OGFRQ9NZT2 677 aa11.51□□□□□ -0.57
TUBB1-201ENST00000217133 SOS1Q07889 1333 aaPredicted RBP11.5□□□□□ -0.57
TUBB1-201ENST00000217133 TYRO3Q06418 890 aa11.5□□□□□ -0.57
TUBB1-201ENST00000217133 TPD52L1Q16890 204 aaPredicted RBP11.5□□□□□ -0.57
TUBB1-201ENST00000217133 LARP1BQ659C4 914 aaKnown RBP11.5□□□□□ -0.57
TUBB1-201ENST00000217133 DDX54Q8TDD1 881 aaKnown RBP11.5□□□□□ -0.57
TUBB1-201ENST00000217133 ZSCAN31Q96LW9 406 aaPredicted RBP11.5□□□□□ -0.57
TUBB1-201ENST00000217133 CYP46A1Q9Y6A2 500 aa11.5□□□□□ -0.57
TUBB1-201ENST00000217133 CPS1P31327 1500 aa11.5□□□□□ -0.57
TUBB1-201ENST00000217133 LARGE1O95461 756 aa11.5□□□□□ -0.57
TUBB1-201ENST00000217133 LRMPQ12912 555 aa11.5□□□□□ -0.57
TUBB1-201ENST00000217133 RUFY2Q8WXA3 655 aa11.5□□□□□ -0.57
TUBB1-201ENST00000217133 IL17RAQ96F46 866 aa11.5□□□□□ -0.57
TUBB1-201ENST00000217133 CTIFO43310 598 aaKnown RBP11.5□□□□□ -0.57
TUBB1-201ENST00000217133 SH2B1Q9NRF2 756 aaPredicted RBP11.5□□□□□ -0.57
TUBB1-201ENST00000217133 SMTNL1A8MU46 457 aa11.49□□□□□ -0.57
TUBB1-201ENST00000217133 RAB11FIP3O75154 756 aa11.49□□□□□ -0.57
TUBB1-201ENST00000217133 PRPF40BQ6NWY9 871 aaKnown RBP11.49□□□□□ -0.57
TUBB1-201ENST00000217133 RHPN1Q8TCX5 695 aa11.49□□□□□ -0.57
TUBB1-201ENST00000217133 LSG1Q9H089 658 aaKnown RBP11.49□□□□□ -0.57
TUBB1-201ENST00000217133 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
TUBB1-201ENST00000217133 NCBP1Q09161 790 aaKnown RBP11.49□□□□□ -0.57
TUBB1-201ENST00000217133 PPP1R42Q7Z4L9 355 aa11.49□□□□□ -0.57
TUBB1-201ENST00000217133 NECAB1Q8N987 351 aa11.49□□□□□ -0.57
TUBB1-201ENST00000217133 TCHHQ07283 1943 aa11.49□□□□□ -0.57
TUBB1-201ENST00000217133 SRGAP3O43295 1099 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
TUBB1-201ENST00000217133 MTHFSDQ2M296 383 aaKnown RBP11.48□□□□□ -0.57
TUBB1-201ENST00000217133 ANO6Q4KMQ2 910 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 CGNQ9P2M7 1197 aaKnown RBP11.48□□□□□ -0.57
TUBB1-201ENST00000217133 PSME1Q06323 249 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 FAM173BQ6P4H8 233 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 KLHL34Q8N239 644 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 KIF1BPQ96EK5 621 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 HYPKQ9NX55 129 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 DACT1Q9NYF0 836 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 DLG5Q8TDM6 1919 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 LIG1P18858 919 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 TTC6Q86TZ1 520 aa11.48□□□□□ -0.57
TUBB1-201ENST00000217133 BICD2Q8TD16 824 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 CBX8Q9HC52 389 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 NRBP1Q9UHY1 535 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 MRVI1Q9Y6F6 885 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 VPS53Q5VIR6 699 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 USP44Q9H0E7 712 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 PAXBP1Q9Y5B6 917 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 STRCQ7RTU9 1775 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 PDCP20941 246 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 SPATA32Q96LK8 384 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 TFIP11Q9UBB9 837 aaKnown RBP11.47□□□□□ -0.57
TUBB1-201ENST00000217133 CLIP2Q9UDT6 1046 aa11.47□□□□□ -0.57
TUBB1-201ENST00000217133 CRB1P82279 1406 aa11.46□□□□□ -0.57
TUBB1-201ENST00000217133 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.57
TUBB1-201ENST00000217133 GOLGA6L19H0YKK7 550 aa11.46□□□□□ -0.57
TUBB1-201ENST00000217133 TAF3Q5VWG9 929 aa11.46□□□□□ -0.57
TUBB1-201ENST00000217133 PI4K2BQ8TCG2 481 aa11.46□□□□□ -0.57
TUBB1-201ENST00000217133 SSH3Q8TE77 659 aa11.46□□□□□ -0.57
TUBB1-201ENST00000217133 DIP2AQ14689 1571 aa11.46□□□□□ -0.58
TUBB1-201ENST00000217133 ZNF165P49910 485 aa11.46□□□□□ -0.58
TUBB1-201ENST00000217133 ZNF75DP51815 510 aa11.46□□□□□ -0.58
TUBB1-201ENST00000217133 ZSCAN25Q6NSZ9 544 aa11.46□□□□□ -0.58
TUBB1-201ENST00000217133 ABTB2Q8N961 1025 aa11.46□□□□□ -0.58
TUBB1-201ENST00000217133 XRN1Q8IZH2 1706 aaKnown RBP11.46□□□□□ -0.58
TUBB1-201ENST00000217133 GLRX3O76003 335 aaKnown RBP11.45□□□□□ -0.58
TUBB1-201ENST00000217133 NLRP6P59044 892 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms