RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 PLA2G4AP47712 749 aa17.27■□□□□ 0.36
PTPRA-201ENST00000216877 FAM193AP78312 1265 aa17.27■□□□□ 0.36
PTPRA-201ENST00000216877 HMOX1P09601 288 aa17.27■□□□□ 0.35
PTPRA-201ENST00000216877 KIF1BPQ96EK5 621 aa17.26■□□□□ 0.35
PTPRA-201ENST00000216877 DNAI1Q9UI46 699 aa17.26■□□□□ 0.35
PTPRA-201ENST00000216877 A0A087WWV3 80 aa17.26■□□□□ 0.35
PTPRA-201ENST00000216877 FAM212AQ96EL1 285 aa17.26■□□□□ 0.35
PTPRA-201ENST00000216877 INTS4Q96HW7 963 aaKnown RBP17.26■□□□□ 0.35
PTPRA-201ENST00000216877 NCAPGQ9BPX3 1015 aa17.26■□□□□ 0.35
PTPRA-201ENST00000216877 TMEM131LA2VDJ0 1609 aa17.26■□□□□ 0.35
PTPRA-201ENST00000216877 MRVI1Q9Y6F6 885 aa17.26■□□□□ 0.35
PTPRA-201ENST00000216877 PHF23Q9BUL5 403 aaPredicted RBP17.25■□□□□ 0.35
PTPRA-201ENST00000216877 DCTPP1Q9H773 170 aa17.25■□□□□ 0.35
PTPRA-201ENST00000216877 ZSWIM4Q9H7M6 989 aa17.25■□□□□ 0.35
PTPRA-201ENST00000216877 RNF20Q5VTR2 975 aa17.25■□□□□ 0.35
PTPRA-201ENST00000216877 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
PTPRA-201ENST00000216877 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
PTPRA-201ENST00000216877 FHOD1Q9Y613 1164 aa17.25■□□□□ 0.35
PTPRA-201ENST00000216877 NRDCO43847 1150 aa17.25■□□□□ 0.35
PTPRA-201ENST00000216877 CREBRFQ8IUR6 639 aa17.25■□□□□ 0.35
PTPRA-201ENST00000216877 LRRC8AQ8IWT6 810 aa17.25■□□□□ 0.35
PTPRA-201ENST00000216877 SMC1AQ14683 1233 aaKnown RBP17.24■□□□□ 0.35
PTPRA-201ENST00000216877 LMOD2Q6P5Q4 547 aa17.24■□□□□ 0.35
PTPRA-201ENST00000216877 KDM5AP29375 1690 aaKnown RBP17.24■□□□□ 0.35
PTPRA-201ENST00000216877 CUL4AQ13619 759 aa17.24■□□□□ 0.35
PTPRA-201ENST00000216877 ZRSR1Q15695 479 aaKnown RBP17.24■□□□□ 0.35
PTPRA-201ENST00000216877 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
PTPRA-201ENST00000216877 GJB2P29033 226 aa17.24■□□□□ 0.35
PTPRA-201ENST00000216877 FOSBP53539 338 aa17.24■□□□□ 0.35
PTPRA-201ENST00000216877 SIRT1Q96EB6 747 aa17.24■□□□□ 0.35
PTPRA-201ENST00000216877 API5Q9BZZ5 524 aaKnown RBP17.24■□□□□ 0.35
PTPRA-201ENST00000216877 PLEKHA4Q9H4M7 779 aa17.24■□□□□ 0.35
PTPRA-201ENST00000216877 PHACTR2O75167 634 aa17.23■□□□□ 0.35
PTPRA-201ENST00000216877 MCM6Q14566 821 aa17.23■□□□□ 0.35
PTPRA-201ENST00000216877 TWISTNBQ3B726 338 aaPredicted RBP17.23■□□□□ 0.35
PTPRA-201ENST00000216877 ESYT1Q9BSJ8 1104 aa17.23■□□□□ 0.35
PTPRA-201ENST00000216877 YY1AP1Q9H869 796 aa17.23■□□□□ 0.35
PTPRA-201ENST00000216877 TAOK2Q9UL54 1235 aa17.23■□□□□ 0.35
PTPRA-201ENST00000216877 SMC2O95347 1197 aa17.23■□□□□ 0.35
PTPRA-201ENST00000216877 KRT85P78386 507 aa17.23■□□□□ 0.35
PTPRA-201ENST00000216877 KRT24Q2M2I5 525 aa17.23■□□□□ 0.35
PTPRA-201ENST00000216877 ALDH1L2Q3SY69 923 aa17.23■□□□□ 0.35
PTPRA-201ENST00000216877 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
PTPRA-201ENST00000216877 VPS18Q9P253 973 aa17.22■□□□□ 0.35
PTPRA-201ENST00000216877 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
PTPRA-201ENST00000216877 RAD50Q92878 1312 aa17.22■□□□□ 0.35
PTPRA-201ENST00000216877 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
PTPRA-201ENST00000216877 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
PTPRA-201ENST00000216877 AGLP35573 1532 aa17.22■□□□□ 0.35
PTPRA-201ENST00000216877 MNAT1P51948 309 aa17.22■□□□□ 0.35
PTPRA-201ENST00000216877 SRLQ86TD4 932 aa17.22■□□□□ 0.35
PTPRA-201ENST00000216877 ARHGEF40Q8TER5 1519 aa17.22■□□□□ 0.35
PTPRA-201ENST00000216877 CARD6Q9BX69 1037 aa17.21■□□□□ 0.35
PTPRA-201ENST00000216877 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.35
PTPRA-201ENST00000216877 CT47A1Q5JQC4 288 aaPredicted RBP17.21■□□□□ 0.35
PTPRA-201ENST00000216877 GUCY2CP25092 1073 aa17.21■□□□□ 0.35
PTPRA-201ENST00000216877 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
PTPRA-201ENST00000216877 SPATA32Q96LK8 384 aa17.21■□□□□ 0.35
PTPRA-201ENST00000216877 ARHGEF28Q8N1W1 1705 aaKnown RBP17.2■□□□□ 0.34
PTPRA-201ENST00000216877 PRKAR2BP31323 418 aa17.2■□□□□ 0.34
PTPRA-201ENST00000216877 PDE1AP54750 535 aa17.2■□□□□ 0.34
PTPRA-201ENST00000216877 MICALL1Q8N3F8 863 aa17.2■□□□□ 0.34
PTPRA-201ENST00000216877 FUCA2Q9BTY2 467 aa17.2■□□□□ 0.34
PTPRA-201ENST00000216877 ABCC11Q96J66 1382 aa17.2■□□□□ 0.34
PTPRA-201ENST00000216877 NEXMIFQ5QGS0 1516 aa17.2■□□□□ 0.34
PTPRA-201ENST00000216877 SETBP1Q9Y6X0 1596 aa17.2■□□□□ 0.34
PTPRA-201ENST00000216877 TDO2P48775 406 aa17.2■□□□□ 0.34
PTPRA-201ENST00000216877 MYOM2P54296 1465 aa17.2■□□□□ 0.34
PTPRA-201ENST00000216877 HMMRO75330 724 aa17.19■□□□□ 0.34
PTPRA-201ENST00000216877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.19■□□□□ 0.346e-7■■■□□ 15.6
PTPRA-201ENST00000216877 MINK1Q8N4C8 1332 aaPredicted RBP17.19■□□□□ 0.34
PTPRA-201ENST00000216877 AK2P54819 239 aa17.19■□□□□ 0.34
PTPRA-201ENST00000216877 ISM2Q6H9L7 571 aa17.19■□□□□ 0.34
PTPRA-201ENST00000216877 ZNF526Q8TF50 670 aaPredicted RBP17.19■□□□□ 0.34
PTPRA-201ENST00000216877 ERCC4Q92889 916 aaPredicted RBP17.19■□□□□ 0.34
PTPRA-201ENST00000216877 ARHGAP31Q2M1Z3 1444 aa17.19■□□□□ 0.34
PTPRA-201ENST00000216877 VAMP4O75379 141 aa17.19■□□□□ 0.34
PTPRA-201ENST00000216877 PSEN1P49768 467 aa17.19■□□□□ 0.34
PTPRA-201ENST00000216877 AXDND1Q5T1B0 1012 aaPredicted RBP17.18■□□□□ 0.34
PTPRA-201ENST00000216877 TTC6Q86TZ1 520 aa17.18■□□□□ 0.34
PTPRA-201ENST00000216877 FBLN1P23142 703 aa17.18■□□□□ 0.34
PTPRA-201ENST00000216877 EVCP57679 992 aa17.18■□□□□ 0.34
PTPRA-201ENST00000216877 PACS2Q86VP3 889 aa17.18■□□□□ 0.34
PTPRA-201ENST00000216877 NFATC2IPQ8NCF5 419 aa17.18■□□□□ 0.34
PTPRA-201ENST00000216877 FBXO18Q8NFZ0 1043 aa17.18■□□□□ 0.34
PTPRA-201ENST00000216877 DNAAF4Q8WXU2 420 aa17.18■□□□□ 0.34
PTPRA-201ENST00000216877 MEIS3Q99687 375 aa17.18■□□□□ 0.34
PTPRA-201ENST00000216877 ADAM21Q9UKJ8 722 aa17.18■□□□□ 0.34
PTPRA-201ENST00000216877 NOS1P29475 1434 aa17.17■□□□□ 0.34
PTPRA-201ENST00000216877 PTPRCP08575 1304 aa17.17■□□□□ 0.34
PTPRA-201ENST00000216877 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
PTPRA-201ENST00000216877 GOLGA5Q8TBA6 731 aa17.17■□□□□ 0.34
PTPRA-201ENST00000216877 ARFGAP3Q9NP61 516 aa17.17■□□□□ 0.34
PTPRA-201ENST00000216877 LIMCH1Q9UPQ0 1083 aa17.17■□□□□ 0.34
PTPRA-201ENST00000216877 CD109Q6YHK3 1445 aa17.17■□□□□ 0.34
PTPRA-201ENST00000216877 DNAJC21Q5F1R6 531 aaKnown RBP17.17■□□□□ 0.34
PTPRA-201ENST00000216877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■■□□ 16.5
PTPRA-201ENST00000216877 CCDC102AQ96A19 550 aa17.17■□□□□ 0.34
PTPRA-201ENST00000216877 IL1RAPL2Q9NP60 686 aa17.17■□□□□ 0.34
PTPRA-201ENST00000216877 CEP83Q9Y592 693 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms