RNA–Protein interactions for RNA: ENST00000205636.3

CMTM6-201, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM6, Length 3,863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-201ENST00000205636 CCDC30Q5VVM6 783 aa17.12■□□□□ 0.33
CMTM6-201ENST00000205636 NYAP1Q6ZVC0 841 aa17.12■□□□□ 0.33
CMTM6-201ENST00000205636 IRAK4Q9NWZ3 460 aa17.12■□□□□ 0.33
CMTM6-201ENST00000205636 STAG3Q9UJ98 1225 aa17.12■□□□□ 0.33
CMTM6-201ENST00000205636 TUBB4AP04350 444 aa17.11■□□□□ 0.33
CMTM6-201ENST00000205636 CCDC83Q8IWF9 413 aa17.11■□□□□ 0.33
CMTM6-201ENST00000205636 SUGP1Q8IWZ8 645 aaKnown RBP17.11■□□□□ 0.33
CMTM6-201ENST00000205636 POLR3AO14802 1390 aaPredicted RBP17.11■□□□□ 0.33
CMTM6-201ENST00000205636 ALDH1L2Q3SY69 923 aa17.11■□□□□ 0.33
CMTM6-201ENST00000205636 LARP1BQ659C4 914 aaKnown RBP17.11■□□□□ 0.33
CMTM6-201ENST00000205636 TMC6Q7Z403 805 aa17.11■□□□□ 0.33
CMTM6-201ENST00000205636 NUCKS1Q9H1E3 243 aaKnown RBP17.11■□□□□ 0.33
CMTM6-201ENST00000205636 TFIP11Q9UBB9 837 aaKnown RBP17.11■□□□□ 0.33
CMTM6-201ENST00000205636 CAVIN2O95810 425 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 CORO7P57737 925 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 ISM2Q6H9L7 571 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 PLA2G4DQ86XP0 818 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 JPH2Q9BR39 696 aaPredicted RBP17.1■□□□□ 0.33
CMTM6-201ENST00000205636 PPIP5K1Q6PFW1 1433 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 ABCC11Q96J66 1382 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 EFCAB8A8MWE9 144 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 KIAA0754O94854 1291 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 TMPOP42166 694 aaKnown RBP17.1■□□□□ 0.33
CMTM6-201ENST00000205636 DHX8Q14562 1220 aaKnown RBP17.1■□□□□ 0.33
CMTM6-201ENST00000205636 CC2D1AQ6P1N0 951 aaPredicted RBP17.1■□□□□ 0.33
CMTM6-201ENST00000205636 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
CMTM6-201ENST00000205636 FUCA2Q9BTY2 467 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 NAT10Q9H0A0 1025 aaKnown RBP17.1■□□□□ 0.33
CMTM6-201ENST00000205636 PLXNC1O60486 1568 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 ZKSCAN8Q15776 578 aaPredicted RBP17.1■□□□□ 0.33
CMTM6-201ENST00000205636 CWC27Q6UX04 472 aaKnown RBP17.1■□□□□ 0.33
CMTM6-201ENST00000205636 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
CMTM6-201ENST00000205636 PDE11AQ9HCR9 933 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 PSD3Q9NYI0 1048 aa17.1■□□□□ 0.33
CMTM6-201ENST00000205636 LRRFIP1Q32MZ4 808 aaKnown RBP17.09■□□□□ 0.33
CMTM6-201ENST00000205636 EPC1Q9H2F5 836 aa17.09■□□□□ 0.33
CMTM6-201ENST00000205636 CDK13Q14004 1512 aaKnown RBP17.09■□□□□ 0.33
CMTM6-201ENST00000205636 DTNBO60941 627 aa17.09■□□□□ 0.33
CMTM6-201ENST00000205636 GJB2P29033 226 aa17.09■□□□□ 0.33
CMTM6-201ENST00000205636 SWT1Q5T5J6 900 aaKnown RBP17.09■□□□□ 0.33
CMTM6-201ENST00000205636 GPR161Q8N6U8 529 aaKnown RBP17.09■□□□□ 0.33
CMTM6-201ENST00000205636 EBAG9O00559 213 aa17.08■□□□□ 0.33
CMTM6-201ENST00000205636 ETF1P62495 437 aaKnown RBP17.08■□□□□ 0.33
CMTM6-201ENST00000205636 TRDNQ13061 729 aa17.08■□□□□ 0.33
CMTM6-201ENST00000205636 CEP57L1Q8IYX8 460 aa17.08■□□□□ 0.32
CMTM6-201ENST00000205636 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
CMTM6-201ENST00000205636 ERCC4Q92889 916 aaPredicted RBP17.08■□□□□ 0.32
CMTM6-201ENST00000205636 PALD1Q9ULE6 856 aa17.08■□□□□ 0.32
CMTM6-201ENST00000205636 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.32
CMTM6-201ENST00000205636 FMNL3Q8IVF7 1028 aa17.08■□□□□ 0.32
CMTM6-201ENST00000205636 LRRN4CLQ8ND94 238 aa17.08■□□□□ 0.32
CMTM6-201ENST00000205636 ZRANB2O95218 330 aaKnown RBP eCLIP17.07■□□□□ 0.32
CMTM6-201ENST00000205636 SUDS3Q9H7L9 328 aaPredicted RBP17.07■□□□□ 0.32
CMTM6-201ENST00000205636 VEZTQ9HBM0 779 aa17.07■□□□□ 0.32
CMTM6-201ENST00000205636 ATG3Q9NT62 314 aa17.07■□□□□ 0.32
CMTM6-201ENST00000205636 GNG11P61952 73 aa17.07■□□□□ 0.32
CMTM6-201ENST00000205636 CCDC73Q6ZRK6 1079 aa17.07■□□□□ 0.32
CMTM6-201ENST00000205636 HDXQ7Z353 690 aa17.07■□□□□ 0.32
CMTM6-201ENST00000205636 PPP1R13BQ96KQ4 1090 aa17.07■□□□□ 0.32
CMTM6-201ENST00000205636 SCAND2PQ9GZW5 306 aaPredicted RBP17.07■□□□□ 0.32
CMTM6-201ENST00000205636 LONRF2Q1L5Z9 754 aa17.07■□□□□ 0.32
CMTM6-201ENST00000205636 DCTPP1Q9H773 170 aa17.07■□□□□ 0.32
CMTM6-201ENST00000205636 TBC1D8O95759 1140 aa17.06■□□□□ 0.32
CMTM6-201ENST00000205636 GOLGA1Q92805 767 aa17.06■□□□□ 0.32
CMTM6-201ENST00000205636 SMARCC1Q92922 1105 aaPredicted RBP17.06■□□□□ 0.32
CMTM6-201ENST00000205636 MRFAP1L1Q96HT8 127 aa17.06■□□□□ 0.32
CMTM6-201ENST00000205636 ESYT1Q9BSJ8 1104 aa17.06■□□□□ 0.32
CMTM6-201ENST00000205636 FAN1Q9Y2M0 1017 aa17.06■□□□□ 0.32
CMTM6-201ENST00000205636 IPO7O95373 1038 aaKnown RBP17.06■□□□□ 0.32
CMTM6-201ENST00000205636 MAGI3Q5TCQ9 1506 aa17.06■□□□□ 0.32
CMTM6-201ENST00000205636 ATAD2Q6PL18 1390 aa17.06■□□□□ 0.32
CMTM6-201ENST00000205636 PPP2R3AQ06190 1150 aa17.06■□□□□ 0.32
CMTM6-201ENST00000205636 FOXR1Q6PIV2 292 aa17.06■□□□□ 0.32
CMTM6-201ENST00000205636 CDC25BP30305 580 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 CDR1P51861 262 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 SHTN1A0MZ66 631 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 KINO60870 393 aaKnown RBP17.05■□□□□ 0.32
CMTM6-201ENST00000205636 SCP2P22307 547 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 STX1AQ16623 288 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 L2HGDHQ9H9P8 463 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 INPP5BP32019 993 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 NEDD9Q14511 834 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 MFSD4BQ5TF39 518 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 CNNM3Q8NE01 707 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
CMTM6-201ENST00000205636 PDCP20941 246 aa17.04■□□□□ 0.32
CMTM6-201ENST00000205636 CEBPZQ03701 1054 aaKnown RBP17.04■□□□□ 0.32
CMTM6-201ENST00000205636 AP1ARQ63HQ0 302 aa17.04■□□□□ 0.32
CMTM6-201ENST00000205636 CPSF2Q9P2I0 782 aaKnown RBP17.04■□□□□ 0.32
CMTM6-201ENST00000205636 ZSCAN12O43309 604 aa17.04■□□□□ 0.32
CMTM6-201ENST00000205636 NAP1L1P55209 391 aaKnown RBP17.04■□□□□ 0.32
CMTM6-201ENST00000205636 FAM173BQ6P4H8 233 aa17.04■□□□□ 0.32
CMTM6-201ENST00000205636 RBM5P52756 815 aaKnown RBP eCLIP17.04■□□□□ 0.32
CMTM6-201ENST00000205636 IQUBQ8NA54 791 aa17.04■□□□□ 0.32
CMTM6-201ENST00000205636 N4BP2L2Q92802 583 aaPredicted RBP17.04■□□□□ 0.32
CMTM6-201ENST00000205636 REXO1L1PQ8IX06 675 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms