RNA–Protein interactions for RNA: ENST00000204566.6

SPG21-201, Transcript of SPG21, maspardin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG21, Length 1,822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-201ENST00000204566 NECTIN2Q92692 538 aa29.39■■■□□ 2.3
SPG21-201ENST00000204566 LRRCC1Q9C099 1032 aa29.39■■■□□ 2.3
SPG21-201ENST00000204566 IL17RAQ96F46 866 aa29.38■■■□□ 2.29
SPG21-201ENST00000204566 SLC4A10Q6U841 1118 aa29.38■■■□□ 2.29
SPG21-201ENST00000204566 G2E3Q7L622 706 aa29.38■■■□□ 2.29
SPG21-201ENST00000204566 TTC5Q8N0Z6 440 aa29.38■■■□□ 2.29
SPG21-201ENST00000204566 C5P01031 1676 aa29.38■■■□□ 2.29
SPG21-201ENST00000204566 LRP6O75581 1613 aa29.38■■■□□ 2.29
SPG21-201ENST00000204566 ATP8B2P98198 1209 aa29.37■■■□□ 2.29
SPG21-201ENST00000204566 FLIIQ13045 1269 aa29.37■■■□□ 2.29
SPG21-201ENST00000204566 PPP1R9BQ96SB3 815 aa29.37■■■□□ 2.29
SPG21-201ENST00000204566 EIF2S2P20042 333 aaKnown RBP29.36■■■□□ 2.29
SPG21-201ENST00000204566 SLC39A6Q13433 755 aa29.36■■■□□ 2.29
SPG21-201ENST00000204566 STAP2Q9UGK3 403 aa29.36■■■□□ 2.29
SPG21-201ENST00000204566 SPATA31A5Q5VU36 1347 aa29.35■■■□□ 2.29
SPG21-201ENST00000204566 SPATA31A7Q8IWB4 1347 aa29.35■■■□□ 2.29
SPG21-201ENST00000204566 UBR2Q8IWV8 1755 aa29.35■■■□□ 2.29
SPG21-201ENST00000204566 NASPP49321 788 aaPredicted RBP29.34■■■□□ 2.29
SPG21-201ENST00000204566 APBB1O00213 710 aa29.34■■■□□ 2.29
SPG21-201ENST00000204566 GLI3P10071 1580 aa29.34■■■□□ 2.29
SPG21-201ENST00000204566 MCTP1Q6DN14 999 aa29.34■■■□□ 2.29
SPG21-201ENST00000204566 LMBRD1Q9NUN5 540 aa29.34■■■□□ 2.29
SPG21-201ENST00000204566 AK9Q5TCS8 1911 aa29.33■■■□□ 2.29
SPG21-201ENST00000204566 LAMB4A4D0S4 1761 aa29.33■■■□□ 2.29
SPG21-201ENST00000204566 MX1P20591 662 aa29.33■■■□□ 2.29
SPG21-201ENST00000204566 FKBP5Q13451 457 aaPredicted RBP29.33■■■□□ 2.29
SPG21-201ENST00000204566 ESYT1Q9BSJ8 1104 aa29.33■■■□□ 2.29
SPG21-201ENST00000204566 F6X3S4 739 aa29.32■■■□□ 2.28
SPG21-201ENST00000204566 CHPF2Q9P2E5 772 aa29.32■■■□□ 2.28
SPG21-201ENST00000204566 DBF4Q9UBU7 674 aaPredicted RBP29.32■■■□□ 2.28
SPG21-201ENST00000204566 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.32■■■□□ 2.28
SPG21-201ENST00000204566 EXOC5O00471 708 aa29.31■■■□□ 2.28
SPG21-201ENST00000204566 UNC5CLQ8IV45 518 aa29.31■■■□□ 2.28
SPG21-201ENST00000204566 FMNL2Q96PY5 1086 aa29.31■■■□□ 2.28
SPG21-201ENST00000204566 C8orf37Q96NL8 207 aa29.31■■■□□ 2.28
SPG21-201ENST00000204566 INTS4Q96HW7 963 aaKnown RBP29.3■■■□□ 2.28
SPG21-201ENST00000204566 ZNF496Q96IT1 587 aaPredicted RBP29.3■■■□□ 2.28
SPG21-201ENST00000204566 BCL9LQ86UU0 1499 aa29.29■■■□□ 2.28
SPG21-201ENST00000204566 BARGINQ6ZT62 677 aa29.29■■■□□ 2.28
SPG21-201ENST00000204566 NGLY1Q96IV0 654 aa29.29■■■□□ 2.28
SPG21-201ENST00000204566 RAB11FIP3O75154 756 aa29.28■■■□□ 2.28
SPG21-201ENST00000204566 HSPA1LP34931 641 aa29.28■■■□□ 2.28
SPG21-201ENST00000204566 CUL4AQ13619 759 aa29.28■■■□□ 2.28
SPG21-201ENST00000204566 KCPQ6ZWJ8 1503 aa29.28■■■□□ 2.28
SPG21-201ENST00000204566 PRAMEF22A3QJZ6 481 aa29.27■■■□□ 2.28
SPG21-201ENST00000204566 SNRPA1P09661 255 aaKnown RBP29.27■■■□□ 2.28
SPG21-201ENST00000204566 HS1BP3Q53T59 392 aa29.27■■■□□ 2.28
SPG21-201ENST00000204566 EXOC6BQ9Y2D4 811 aa29.27■■■□□ 2.28
SPG21-201ENST00000204566 CCDC9Q9Y3X0 531 aaKnown RBP29.27■■■□□ 2.28
SPG21-201ENST00000204566 TMOD3Q9NYL9 352 aa29.27■■■□□ 2.28
SPG21-201ENST00000204566 ITGB4P16144 1822 aa29.26■■■□□ 2.27
SPG21-201ENST00000204566 MBD3O95983 291 aa29.26■■■□□ 2.27
SPG21-201ENST00000204566 FNBP4Q8N3X1 1017 aaPredicted RBP29.26■■■□□ 2.27
SPG21-201ENST00000204566 PHAXQ9H814 394 aaKnown RBP29.26■■■□□ 2.27
SPG21-201ENST00000204566 CHMLP26374 656 aa29.25■■■□□ 2.27
SPG21-201ENST00000204566 VPS72Q15906 364 aa29.24■■■□□ 2.27
SPG21-201ENST00000204566 DDB1Q16531 1140 aa29.24■■■□□ 2.27
SPG21-201ENST00000204566 ZSCAN23Q3MJ62 389 aa29.24■■■□□ 2.27
SPG21-201ENST00000204566 NEK4P51957 841 aa29.24■■■□□ 2.27
SPG21-201ENST00000204566 ZGPATQ8N5A5 531 aaKnown RBP29.24■■■□□ 2.27
SPG21-201ENST00000204566 TMX3Q96JJ7 454 aa29.23■■■□□ 2.27
SPG21-201ENST00000204566 DDX21Q9NR30 783 aaKnown RBP eCLIP29.23■■■□□ 2.27
SPG21-201ENST00000204566 HYPKQ9NX55 129 aa29.23■■■□□ 2.27
SPG21-201ENST00000204566 DOT1LQ8TEK3 1739 aa29.23■■■□□ 2.27
SPG21-201ENST00000204566 UBTFL1P0CB47 393 aaPredicted RBP29.22■■■□□ 2.27
SPG21-201ENST00000204566 SSH3Q8TE77 659 aa29.22■■■□□ 2.27
SPG21-201ENST00000204566 CAVIN1Q6NZI2 390 aaKnown RBP29.22■■■□□ 2.27
SPG21-201ENST00000204566 ZDHHC9Q9Y397 364 aa29.22■■■□□ 2.27
SPG21-201ENST00000204566 PNMA6EA0A0J9YXQ4 647 aa29.21■■■□□ 2.27
SPG21-201ENST00000204566 NAP1L5Q96NT1 182 aaPredicted RBP29.2■■■□□ 2.27
SPG21-201ENST00000204566 ANXA1P04083 346 aa29.2■■■□□ 2.26
SPG21-201ENST00000204566 LRRFIP2Q9Y608 721 aaKnown RBP29.2■■■□□ 2.26
SPG21-201ENST00000204566 BRD1O95696 1058 aa29.19■■■□□ 2.26
SPG21-201ENST00000204566 PKP1Q13835 747 aa29.19■■■□□ 2.26
SPG21-201ENST00000204566 PROSER3Q2NL68 480 aa29.19■■■□□ 2.26
SPG21-201ENST00000204566 ZSCAN30Q86W11 494 aa29.19■■■□□ 2.26
SPG21-201ENST00000204566 BCL9O00512 1426 aa29.18■■■□□ 2.26
SPG21-201ENST00000204566 ERBB4Q15303 1308 aa29.18■■■□□ 2.26
SPG21-201ENST00000204566 TRIM6-TRIM34B2RNG4 842 aa29.17■■■□□ 2.26
SPG21-201ENST00000204566 PRPF40AO75400 957 aaKnown RBP29.17■■■□□ 2.26
SPG21-201ENST00000204566 NCLP19338 710 aaKnown RBP29.17■■■□□ 2.26
SPG21-201ENST00000204566 MEX3CQ5U5Q3 659 aaKnown RBP29.17■■■□□ 2.26
SPG21-201ENST00000204566 USP44Q9H0E7 712 aa29.17■■■□□ 2.26
SPG21-201ENST00000204566 POLA2Q14181 598 aa29.17■■■□□ 2.26
SPG21-201ENST00000204566 PDIA6Q15084 440 aa29.17■■■□□ 2.26
SPG21-201ENST00000204566 USP21Q9UK80 565 aa29.17■■■□□ 2.26
SPG21-201ENST00000204566 HSP90AB4PQ58FF6 505 aa29.16■■■□□ 2.26
SPG21-201ENST00000204566 RILPL2Q969X0 211 aa29.16■■■□□ 2.26
SPG21-201ENST00000204566 ANO2Q9NQ90 1003 aa29.16■■■□□ 2.26
SPG21-201ENST00000204566 ADCY9O60503 1353 aa29.16■■■□□ 2.26
SPG21-201ENST00000204566 DNAAF4Q8WXU2 420 aa29.15■■■□□ 2.26
SPG21-201ENST00000204566 PIGBQ92521 554 aa29.15■■■□□ 2.26
SPG21-201ENST00000204566 USP16Q9Y5T5 823 aa29.15■■■□□ 2.26
SPG21-201ENST00000204566 DDX58O95786 925 aaKnown RBP29.15■■■□□ 2.26
SPG21-201ENST00000204566 LRSAM1Q6UWE0 723 aa29.15■■■□□ 2.26
SPG21-201ENST00000204566 PI4KAP2A4QPH2 592 aa29.14■■■□□ 2.26
SPG21-201ENST00000204566 PI4KAP1Q8N8J0 262 aa29.14■■■□□ 2.26
SPG21-201ENST00000204566 SYAP1Q96A49 352 aaPredicted RBP29.14■■■□□ 2.26
SPG21-201ENST00000204566 GPT2Q8TD30 523 aa29.13■■■□□ 2.25
SPG21-201ENST00000204566 KIF1BPQ96EK5 621 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms