RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 ADCK5Q3MIX3 580 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 CCDC73Q6ZRK6 1079 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 CCAR2Q8N163 923 aaKnown RBP13.24□□□□□ -0.29
ACTN1-201ENST00000193403 ZNF710Q8N1W2 664 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 DNAJC2Q99543 621 aaKnown RBP13.24□□□□□ -0.29
ACTN1-201ENST00000193403 PRDM4Q9UKN5 801 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 SGSM2O43147 1006 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 SMC2O95347 1197 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 PDCP20941 246 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 CDC37L1Q7L3B6 337 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 SDF4Q9BRK5 362 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 MED14O60244 1454 aa13.23□□□□□ -0.29
ACTN1-201ENST00000193403 GLRX3O76003 335 aaKnown RBP13.23□□□□□ -0.29
ACTN1-201ENST00000193403 FAM177A1Q8N128 213 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-201ENST00000193403 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
ACTN1-201ENST00000193403 ACEP12821 1306 aa13.23□□□□□ -0.29
ACTN1-201ENST00000193403 DMTNQ08495 405 aa13.23□□□□□ -0.29
ACTN1-201ENST00000193403 ERCC4Q92889 916 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-201ENST00000193403 RBM8AQ9Y5S9 174 aaKnown RBP13.23□□□□□ -0.29
ACTN1-201ENST00000193403 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-201ENST00000193403 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
ACTN1-201ENST00000193403 TULP1O00294 542 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-201ENST00000193403 NBPF7P0C2Y1 421 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-201ENST00000193403 PTH1RQ03431 593 aa13.23□□□□□ -0.29
ACTN1-201ENST00000193403 GNL2Q13823 731 aaKnown RBP13.23□□□□□ -0.29
ACTN1-201ENST00000193403 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
ACTN1-201ENST00000193403 RAD50Q92878 1312 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 PIK3R4Q99570 1358 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 MAP3K19Q56UN5 1328 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 GLI2P10070 1586 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 PSMA5P28066 241 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 PTPN14Q15678 1187 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 ANKLE2Q86XL3 938 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 ZSCAN31Q96LW9 406 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-201ENST00000193403 RGS12O14924 1447 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 KINO60870 393 aaKnown RBP13.22□□□□□ -0.29
ACTN1-201ENST00000193403 ME1P48163 572 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 TTC6Q86TZ1 520 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-201ENST00000193403 KIAA1524Q8TCG1 905 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 CBX8Q9HC52 389 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
ACTN1-201ENST00000193403 MYL6BP14649 208 aa13.21□□□□□ -0.29
ACTN1-201ENST00000193403 CREBRFQ8IUR6 639 aa13.21□□□□□ -0.29
ACTN1-201ENST00000193403 NEUROD6Q96NK8 337 aa13.21□□□□□ -0.29
ACTN1-201ENST00000193403 MTMR6Q9Y217 621 aa13.21□□□□□ -0.29
ACTN1-201ENST00000193403 MLH3Q9UHC1 1453 aa13.21□□□□□ -0.29
ACTN1-201ENST00000193403 USP44Q9H0E7 712 aa13.21□□□□□ -0.29
ACTN1-201ENST00000193403 TTC21BQ7Z4L5 1316 aa13.21□□□□□ -0.3
ACTN1-201ENST00000193403 PNPLA6Q8IY17 1366 aa13.21□□□□□ -0.3
ACTN1-201ENST00000193403 ME3Q16798 604 aa13.21□□□□□ -0.3
ACTN1-201ENST00000193403 CEP135Q66GS9 1140 aa13.21□□□□□ -0.3
ACTN1-201ENST00000193403 FAM227BQ96M60 508 aa13.21□□□□□ -0.3
ACTN1-201ENST00000193403 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.3
ACTN1-201ENST00000193403 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.3
ACTN1-201ENST00000193403 PSME1Q06323 249 aa13.2□□□□□ -0.3
ACTN1-201ENST00000193403 LARP1Q6PKG0 1096 aaKnown RBP13.2□□□□□ -0.3
ACTN1-201ENST00000193403 SH2B1Q9NRF2 756 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-201ENST00000193403 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
ACTN1-201ENST00000193403 ISM2Q6H9L7 571 aa13.2□□□□□ -0.3
ACTN1-201ENST00000193403 EYA1Q99502 592 aa13.2□□□□□ -0.3
ACTN1-201ENST00000193403 KCNF1Q9H3M0 494 aa13.2□□□□□ -0.3
ACTN1-201ENST00000193403 ECHDC1Q9NTX5 307 aa13.2□□□□□ -0.3
ACTN1-201ENST00000193403 BIN1O00499 593 aa13.19□□□□□ -0.3
ACTN1-201ENST00000193403 DNAAF4Q8WXU2 420 aa13.19□□□□□ -0.3
ACTN1-201ENST00000193403 CCDC85AQ96PX6 553 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-201ENST00000193403 GTPBP4Q9BZE4 634 aaKnown RBP13.19□□□□□ -0.3
ACTN1-201ENST00000193403 SCAND2PQ9GZW5 306 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-201ENST00000193403 TMX1Q9H3N1 280 aa13.19□□□□□ -0.3
ACTN1-201ENST00000193403 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
ACTN1-201ENST00000193403 ZSCAN20P17040 1043 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-201ENST00000193403 BBXQ8WY36 941 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-201ENST00000193403 TOMM22Q9NS69 142 aa13.19□□□□□ -0.3
ACTN1-201ENST00000193403 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
ACTN1-201ENST00000193403 MROH2AA6NES4 1674 aa13.19□□□□□ -0.3
ACTN1-201ENST00000193403 SKILP12757 684 aa13.19□□□□□ -0.3
ACTN1-201ENST00000193403 KCNA6P17658 529 aa13.19□□□□□ -0.3
ACTN1-201ENST00000193403 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
ACTN1-201ENST00000193403 HECW2Q9P2P5 1572 aa13.18□□□□□ -0.3
ACTN1-201ENST00000193403 AP5Z1O43299 807 aa13.18□□□□□ -0.3
ACTN1-201ENST00000193403 NMIQ13287 307 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-201ENST00000193403 RIC3Q7Z5B4 369 aa13.18□□□□□ -0.3
ACTN1-201ENST00000193403 PIP4K2AP48426 406 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-201ENST00000193403 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
ACTN1-201ENST00000193403 COL3A1P02461 1466 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-201ENST00000193403 JAK2O60674 1132 aa13.18□□□□□ -0.3
ACTN1-201ENST00000193403 ARID5BQ14865 1188 aa13.18□□□□□ -0.3
ACTN1-201ENST00000193403 CREB3L3Q68CJ9 461 aa13.18□□□□□ -0.3
ACTN1-201ENST00000193403 ADGRB1O14514 1584 aa13.17□□□□□ -0.3
ACTN1-201ENST00000193403 ADGRB3O60242 1522 aa13.17□□□□□ -0.3
ACTN1-201ENST00000193403 KIF24Q5T7B8 1368 aa13.17□□□□□ -0.3
ACTN1-201ENST00000193403 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
ACTN1-201ENST00000193403 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
ACTN1-201ENST00000193403 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
ACTN1-201ENST00000193403 BRF1Q92994 677 aa13.17□□□□□ -0.3
ACTN1-201ENST00000193403 TPCN1Q9ULQ1 816 aa13.17□□□□□ -0.3
ACTN1-201ENST00000193403 KIDINS220Q9ULH0 1771 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms