RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 ATP10DQ9P241 1426 aa32.58■■■□□ 2.81
TSR3-201ENST00000007390 ERVV-1B6SEH8 477 aa32.57■■■□□ 2.8
TSR3-201ENST00000007390 ANP32CO43423 234 aa32.57■■■□□ 2.8
TSR3-201ENST00000007390 PDE6BP35913 854 aa32.57■■■□□ 2.8
TSR3-201ENST00000007390 MYL6BP14649 208 aa32.56■■■□□ 2.8
TSR3-201ENST00000007390 MAP3K15Q6ZN16 1313 aa32.55■■■□□ 2.8
TSR3-201ENST00000007390 ST5P78524 1137 aa32.55■■■□□ 2.8
TSR3-201ENST00000007390 HLFQ16534 295 aa32.55■■■□□ 2.8
TSR3-201ENST00000007390 NGEFQ8N5V2 710 aa32.55■■■□□ 2.8
TSR3-201ENST00000007390 CFAP44Q96MT7 982 aa32.55■■■□□ 2.8
TSR3-201ENST00000007390 NIP7Q9Y221 180 aaKnown RBP eCLIP32.55■■■□□ 2.8
TSR3-201ENST00000007390 PDIA6Q15084 440 aa32.54■■■□□ 2.8
TSR3-201ENST00000007390 KIF6Q6ZMV9 814 aa32.54■■■□□ 2.8
TSR3-201ENST00000007390 LRP10Q7Z4F1 713 aa32.54■■■□□ 2.8
TSR3-201ENST00000007390 NBPF5PQ86XG9 351 aaPredicted RBP32.54■■■□□ 2.8
TSR3-201ENST00000007390 NPHP1O15259 732 aa32.53■■■□□ 2.8
TSR3-201ENST00000007390 TTLL7Q6ZT98 887 aa32.53■■■□□ 2.8
TSR3-201ENST00000007390 TTLL6Q8N841 843 aa32.53■■■□□ 2.8
TSR3-201ENST00000007390 LAS1LQ9Y4W2 734 aaKnown RBP32.53■■■□□ 2.8
TSR3-201ENST00000007390 EIF2S2P20042 333 aaKnown RBP32.52■■■□□ 2.8
TSR3-201ENST00000007390 CCDC24Q8N4L8 307 aa32.52■■■□□ 2.8
TSR3-201ENST00000007390 HOXB7P09629 217 aa32.5■■■□□ 2.79
TSR3-201ENST00000007390 CALD1Q05682 793 aaKnown RBP32.5■■■□□ 2.79
TSR3-201ENST00000007390 TPTE2Q6XPS3 522 aa32.5■■■□□ 2.79
TSR3-201ENST00000007390 COL11A2P13942 1736 aaPredicted RBP32.5■■■□□ 2.79
TSR3-201ENST00000007390 ZNF853P0CG23 659 aa32.49■■■□□ 2.79
TSR3-201ENST00000007390 KRT24Q2M2I5 525 aa32.49■■■□□ 2.79
TSR3-201ENST00000007390 MRS2Q9HD23 443 aa32.48■■■□□ 2.79
TSR3-201ENST00000007390 PROSER3Q2NL68 480 aa32.47■■■□□ 2.79
TSR3-201ENST00000007390 ZBTB3Q9H5J0 574 aa32.47■■■□□ 2.79
TSR3-201ENST00000007390 IFT57Q9NWB7 429 aa32.47■■■□□ 2.79
TSR3-201ENST00000007390 NUP98P52948 1817 aa32.47■■■□□ 2.79
TSR3-201ENST00000007390 MBIPQ9NS73 344 aa32.46■■■□□ 2.79
TSR3-201ENST00000007390 SRGNP10124 158 aa32.45■■■□□ 2.79
TSR3-201ENST00000007390 STYK1Q6J9G0 422 aa32.45■■■□□ 2.79
TSR3-201ENST00000007390 GIGYF2Q6Y7W6 1299 aaKnown RBP32.45■■■□□ 2.79
TSR3-201ENST00000007390 ZNF622Q969S3 477 aaKnown RBP eCLIP32.45■■■□□ 2.79
TSR3-201ENST00000007390 IBTKQ9P2D0 1353 aaPredicted RBP32.45■■■□□ 2.78
TSR3-201ENST00000007390 KLRG2A4D1S0 409 aaPredicted RBP32.44■■■□□ 2.78
TSR3-201ENST00000007390 GNAI1P63096 354 aa32.44■■■□□ 2.78
TSR3-201ENST00000007390 DDX21Q9NR30 783 aaKnown RBP eCLIP32.44■■■□□ 2.78
TSR3-201ENST00000007390 ANXA1P04083 346 aa32.43■■■□□ 2.78
TSR3-201ENST00000007390 NYXQ9GZU5 481 aa32.43■■■□□ 2.78
TSR3-201ENST00000007390 GPBP1L1Q9HC44 474 aaPredicted RBP32.43■■■□□ 2.78
TSR3-201ENST00000007390 C9orf131Q5VYM1 1079 aa32.42■■■□□ 2.78
TSR3-201ENST00000007390 NECTIN2Q92692 538 aa32.42■■■□□ 2.78
TSR3-201ENST00000007390 MASTLQ96GX5 879 aa32.42■■■□□ 2.78
TSR3-201ENST00000007390 FAM177BA6PVY3 158 aa32.41■■■□□ 2.78
TSR3-201ENST00000007390 HDGFL1Q5TGJ6 251 aa32.41■■■□□ 2.78
TSR3-201ENST00000007390 ZNF34Q8IZ26 560 aa32.41■■■□□ 2.78
TSR3-201ENST00000007390 CNKSR1Q969H4 720 aa32.41■■■□□ 2.78
TSR3-201ENST00000007390 UBN2Q6ZU65 1347 aa32.41■■■□□ 2.78
TSR3-201ENST00000007390 CCDC27Q2M243 656 aa32.4■■■□□ 2.78
TSR3-201ENST00000007390 NCBP3Q53F19 620 aaKnown RBP32.39■■■□□ 2.78
TSR3-201ENST00000007390 DUSP27Q5VZP5 1158 aa32.39■■■□□ 2.78
TSR3-201ENST00000007390 RIC1Q4ADV7 1423 aa32.38■■■□□ 2.77
TSR3-201ENST00000007390 GPTP24298 496 aa32.38■■■□□ 2.77
TSR3-201ENST00000007390 GTF2E1P29083 439 aaPredicted RBP32.38■■■□□ 2.77
TSR3-201ENST00000007390 COPS6Q7L5N1 327 aa32.38■■■□□ 2.77
TSR3-201ENST00000007390 ZNF526Q8TF50 670 aaPredicted RBP32.38■■■□□ 2.77
TSR3-201ENST00000007390 XAGE3Q8WTP9 111 aa32.38■■■□□ 2.77
TSR3-201ENST00000007390 CHPF2Q9P2E5 772 aa32.38■■■□□ 2.77
TSR3-201ENST00000007390 NPR1P16066 1061 aa32.37■■■□□ 2.77
TSR3-201ENST00000007390 RNF181Q9P0P0 153 aa32.37■■■□□ 2.77
TSR3-201ENST00000007390 ABCC12Q96J65 1359 aa32.36■■■□□ 2.77
TSR3-201ENST00000007390 C1QTNF8P60827 252 aa32.36■■■□□ 2.77
TSR3-201ENST00000007390 RASSF7Q02833 373 aa32.36■■■□□ 2.77
TSR3-201ENST00000007390 PARP10Q53GL7 1025 aa32.36■■■□□ 2.77
TSR3-201ENST00000007390 PRPF40BQ6NWY9 871 aaKnown RBP32.36■■■□□ 2.77
TSR3-201ENST00000007390 DBF4Q9UBU7 674 aaPredicted RBP32.36■■■□□ 2.77
TSR3-201ENST00000007390 ARFGEF2Q9Y6D5 1785 aa32.36■■■□□ 2.77
TSR3-201ENST00000007390 NFKBIEO00221 500 aa32.35■■■□□ 2.77
TSR3-201ENST00000007390 SUSD4Q5VX71 490 aa32.35■■■□□ 2.77
TSR3-201ENST00000007390 SBF1O95248 1867 aa32.35■■■□□ 2.77
TSR3-201ENST00000007390 C21orf2O43822 256 aa32.34■■■□□ 2.77
TSR3-201ENST00000007390 NUTM1Q86Y26 1132 aa32.34■■■□□ 2.77
TSR3-201ENST00000007390 NTSR2O95665 410 aa32.33■■■□□ 2.77
TSR3-201ENST00000007390 LMNB1P20700 586 aa32.33■■■□□ 2.77
TSR3-201ENST00000007390 AIMP1Q12904 312 aaKnown RBP32.33■■■□□ 2.77
TSR3-201ENST00000007390 ERFEQ4G0M1 354 aa32.33■■■□□ 2.77
TSR3-201ENST00000007390 HSP90AB3PQ58FF7 597 aa32.33■■■□□ 2.77
TSR3-201ENST00000007390 TNRC6CQ9HCJ0 1690 aaKnown RBP32.33■■■□□ 2.77
TSR3-201ENST00000007390 SLX4Q8IY92 1834 aa32.33■■■□□ 2.77
TSR3-201ENST00000007390 ZC3H4Q9UPT8 1303 aaKnown RBP32.32■■■□□ 2.76
TSR3-201ENST00000007390 CRY2Q49AN0 593 aa32.32■■■□□ 2.76
TSR3-201ENST00000007390 PPP1R42Q7Z4L9 355 aa32.32■■■□□ 2.76
TSR3-201ENST00000007390 WWC1Q8IX03 1113 aa32.32■■■□□ 2.76
TSR3-201ENST00000007390 SOGA3Q5TF21 947 aa32.31■■■□□ 2.76
TSR3-201ENST00000007390 HYPKQ9NX55 129 aa32.31■■■□□ 2.76
TSR3-201ENST00000007390 PRELPP51888 382 aa32.3■■■□□ 2.76
TSR3-201ENST00000007390 RNF123Q5XPI4 1314 aa32.29■■■□□ 2.76
TSR3-201ENST00000007390 LTBP3Q9NS15 1303 aa32.29■■■□□ 2.76
TSR3-201ENST00000007390 C7orf43Q8WVR3 580 aa32.29■■■□□ 2.76
TSR3-201ENST00000007390 ZNF219Q9P2Y4 722 aaPredicted RBP32.29■■■□□ 2.76
TSR3-201ENST00000007390 ANKRD36CQ5JPF3 1778 aa32.29■■■□□ 2.76
TSR3-201ENST00000007390 TCIRG1Q13488 830 aa32.28■■■□□ 2.76
TSR3-201ENST00000007390 C8orf58Q8NAV2 365 aa32.28■■■□□ 2.76
TSR3-201ENST00000007390 FER1L6Q2WGJ9 1857 aa32.28■■■□□ 2.76
TSR3-201ENST00000007390 IL16Q14005 1332 aa32.27■■■□□ 2.76
TSR3-201ENST00000007390 PLBD2Q8NHP8 589 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms