RNA–Protein interactions for RNA: ENSMUST00000173004.1

Lsm2-207, Transcript of U6 snRNA-associated Sm-like protein LSm2, mousemouse

TSL 1 (best) BASIC

Gene Lsm2, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2-207ENSMUST00000173004 Fzd9Q9R216 592 aa16.4■□□□□ 0.22
Lsm2-207ENSMUST00000173004 Itgb7P26011 806 aa16.39■□□□□ 0.21
Lsm2-207ENSMUST00000173004 St5Q924W7 1134 aa16.39■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Amotl1Q9D4H4 968 aa16.39■□□□□ 0.21
Lsm2-207ENSMUST00000173004 MetP16056 1379 aa16.38■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Chrna5Q2MKA5 467 aa16.38■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Rsph6aQ8CDR2 708 aa16.38■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Tiam2Q6ZPF3 1715 aa16.38■□□□□ 0.21
Lsm2-207ENSMUST00000173004 PrxO55103 1391 aa16.38■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Uhrf1bp1B2KF50 1429 aa16.37■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Glt1d1A4FUP9 346 aa16.37■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Cyp2c23E9Q5K4 494 aa16.37■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Ly6dP35459 127 aa16.37■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Mcm10Q0VBD2 885 aa16.37■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Map9Q3TRR0 646 aa16.37■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Eif6O55135 245 aa16.36■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Atp2b4Q6Q477 1205 aa16.36■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Fubp1Q91WJ8 651 aaKnown RBP16.36■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Ly6iQ9WU67 134 aa16.36■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Esco1Q69Z69 843 aa16.35■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Tmem130Q6NXM3 419 aa16.35■□□□□ 0.21
Lsm2-207ENSMUST00000173004 NynrinQ5DTZ0 1840 aa16.35■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Skint7A7XV04 395 aa16.34■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Tom1l2Q5SRX1 507 aa16.34■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Pcsk7Q61139 770 aa16.34■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Champ1Q8K327 802 aaKnown RBP16.34■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Sirt2Q8VDQ8 389 aa16.34■□□□□ 0.21
Lsm2-207ENSMUST00000173004 RragcQ99K70 398 aa16.34■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Ttc5Q99LG4 440 aa16.34■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Dbndd1Q9CZ00 160 aa16.34■□□□□ 0.21
Lsm2-207ENSMUST00000173004 Dpp7Q9ET22 506 aa16.34■□□□□ 0.21
Lsm2-207ENSMUST00000173004 NinQ61043 2035 aa16.33■□□□□ 0.21
Lsm2-207ENSMUST00000173004 PnisrA2AJT4 805 aaKnown RBP16.33■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Trim28Q62318 834 aa16.33■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Tcerg1Q8CGF7 1100 aaKnown RBP16.33■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Pcdh15Q99PJ1 1943 aa16.33■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Ddx60E9PZQ1 1711 aa16.32■□□□□ 0.2
Lsm2-207ENSMUST00000173004 PnnO35691 725 aaKnown RBP16.32■□□□□ 0.2
Lsm2-207ENSMUST00000173004 HunkO88866 714 aa16.32■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Tanc1Q0VGY8 1856 aa16.32■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Gm12185Q5NCB2 835 aa16.32■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Gsdma3Q5Y4Y6 464 aa16.32■□□□□ 0.2
Lsm2-207ENSMUST00000173004 HypkQ9CR41 129 aa16.32■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Pdzrn4E9PUZ9 1014 aa16.31■□□□□ 0.2
Lsm2-207ENSMUST00000173004 CltaO08585 235 aa16.31■□□□□ 0.2
Lsm2-207ENSMUST00000173004 SowahdQ8BY98 327 aa16.31■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Rapgef4Q9EQZ6 1011 aa16.31■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Mical3Q8CJ19 1993 aa16.31■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Arrdc4A0A0B4J1F4 415 aa16.3■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Stox1B2RQL2 990 aa16.3■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Slf2Q6P9P0 1278 aa16.3■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Atxn2lQ7TQH0 1049 aaKnown RBP16.3■□□□□ 0.2
Lsm2-207ENSMUST00000173004 GmpsQ3THK7 693 aa16.29■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Cog5Q8C0L8 829 aa16.29■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Btaf1E9QAE3 1848 aa16.29■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Atp6v0a2P15920 856 aa16.28■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Skor1Q8BX46 964 aa16.28■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Rbm5Q91YE7 815 aaKnown RBP16.28■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Gigyf1Q99MR1 1044 aaKnown RBP16.28■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Duox1A2AQ92 1551 aa16.27■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Mylk2Q8VCR8 613 aa16.27■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Tnip1Q9WUU8 647 aa16.27■□□□□ 0.2
Lsm2-207ENSMUST00000173004 Traf5P70191 558 aa16.26■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Ptrh1Q8BW00 204 aa16.26■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Ppargc1bQ8VHJ7 1014 aa16.26■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Dcaf11Q91VU6 549 aa16.26■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Lama3Q61789 3330 aa16.26■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Prr14lE9Q7C4 1971 aa16.26■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Peak1Q69Z38 1735 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Usp17ldG5E8G2 545 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Usp17lcG5E8I7 545 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Dctn1O08788 1281 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Ifit1bl2Q3U687 466 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Clul1Q3ZRW6 464 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Adam1aQ60813 791 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Ccdc93Q7TQK5 629 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Strip1Q8C079 837 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Shtn1Q8K2Q9 631 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Slc12a5Q91V14 1138 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Slc24a1Q91WD8 1130 aa16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 NgdnQ9DB96 315 aaKnown RBP16.25■□□□□ 0.19
Lsm2-207ENSMUST00000173004 TnikP83510 1323 aa16.24■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Ppp1r15aP17564 657 aa16.24■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Adam39Q7M762 756 aa16.24■□□□□ 0.19
Lsm2-207ENSMUST00000173004 GorabQ8BRM2 368 aa16.24■□□□□ 0.19
Lsm2-207ENSMUST00000173004 C1qtnf12Q8R2Z0 308 aa16.24■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Syt17Q920M7 470 aa16.24■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Psmd1Q3TXS7 953 aa16.23■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Pxylp1Q8BHA9 480 aa16.23■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Prg3Q9JL95 222 aa16.23■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Ppp1r26Q6A025 1163 aa16.21■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Nek9Q8K1R7 984 aa16.21■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Snap47Q8R570 413 aa16.21■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Klf15Q9EPW2 415 aa16.21■□□□□ 0.19
Lsm2-207ENSMUST00000173004 Pde4bB1AWC9 736 aa16.2■□□□□ 0.18
Lsm2-207ENSMUST00000173004 Cnot7Q60809 285 aa16.2■□□□□ 0.18
Lsm2-207ENSMUST00000173004 Mybbp1aQ7TPV4 1344 aaKnown RBP16.19■□□□□ 0.18
Lsm2-207ENSMUST00000173004 Npy5rO70342 466 aa16.19■□□□□ 0.18
Lsm2-207ENSMUST00000173004 Glis3Q6XP49 780 aa16.19■□□□□ 0.18
Lsm2-207ENSMUST00000173004 Rnf181Q9CY62 165 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms