RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Rbm28Q8CGC6 750 aaKnown RBP11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Krt85Q9Z2T6 507 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Gsdma2Q32M21 443 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Gnat3Q3V3I2 354 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Isy1Q69ZQ2 285 aaKnown RBP11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ccdc178Q8CDV0 866 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Itsn2Q9Z0R6 1659 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Bach1P97302 739 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ifit2Q64112 472 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ddx58Q6Q899 926 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Kdm4cQ8VCD7 1054 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 ZwintQ9CQU5 252 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Pdzd9Q9D9M4 266 aa11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Elp1Q7TT37 1333 aaKnown RBP11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 ScaperF8VQ70 1398 aaKnown RBP11.32□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ttll7A4Q9F0 912 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ccp110Q7TSH4 1004 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Larp6Q8BN59 492 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Tmx3Q8BXZ1 456 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Stk38Q91VJ4 465 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Kif2cQ922S8 721 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Xrn1P97789 1719 aaKnown RBP11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Pdia4P08003 638 aaKnown RBP11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Tti2Q8BGV4 512 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Frmd3Q8BHD4 595 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 AidaQ8C4Q6 305 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Nip7Q9CXK8 180 aaKnown RBP11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ankle2Q6P1H6 964 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Chd1lQ9CXF7 900 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 PdcQ9QW08 244 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Plekhg1F6S200 1446 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Fez1Q8K0X8 392 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Adam1bQ8R534 806 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Erc1Q99MI1 1120 aa11.31□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ahdc1Q6PAL7 1594 aaKnown RBP11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Adora1Q60612 326 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ppp6r1Q7TSI3 856 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Atf7Q8R0S1 413 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Rbm5Q91YE7 815 aaKnown RBP11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ccdc47Q9D024 483 aaKnown RBP11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ak2Q9WTP6 239 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Eif2ak4Q9QZ05 1648 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Tpm3-rs7D3Z2H9 248 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Tnni2P13412 182 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Syt1P46096 421 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ddx19aQ61655 478 aaKnown RBP11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Chrna2Q91X60 512 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Wdr17E9Q271 1322 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Cnksr1A2A9K7 700 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Fsd2Q8BZ52 692 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Cwc25Q9DBF7 416 aa11.3□□□□□ -0.6
Trim9-201ENSMUST00000110520 Atf5O70191 283 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Cdca7lQ922M5 438 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Zmym3Q9JLM4 1370 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Odf2lQ9D478 642 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Phkg2Q9DB30 406 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Gm45015A0A140LII9 184 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Gm18336A0A140LIU8 765 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Anxa1P10107 346 aaKnown RBP11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Bend3Q6PAL0 825 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Snx13Q6PHS6 957 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Larp1Q6ZQ58 1072 aaKnown RBP11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ccdc158Q8CDI6 1109 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Abca9Q8K449 1623 aa11.29□□□□□ -0.6
Trim9-201ENSMUST00000110520 Stk36Q69ZM6 1316 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ccdc173A0JLY1 547 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Gas2l3Q3UWW6 683 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Rab3gap1Q80UJ7 981 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Nlrp3Q8R4B8 1033 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Trim34aQ99PP6 485 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 CoilQ5SU73 570 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Asic4Q7TNS7 539 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Tmem87bQ8BKU8 555 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Antxr1Q9CZ52 562 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Rapgef4Q9EQZ6 1011 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Gm21969J3QJZ1 289 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Trim34bJ3QNR8 485 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Ell2Q3UKU1 639 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Unc5clQ6R653 518 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Rbm17Q8JZX4 405 aaKnown RBP11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Krt82Q99M74 516 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Med4Q9CQA5 270 aa11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 NgdnQ9DB96 315 aaKnown RBP11.28□□□□□ -0.6
Trim9-201ENSMUST00000110520 Lmod1Q8BVA4 595 aa11.27□□□□□ -0.6
Trim9-201ENSMUST00000110520 Mapk8ip1Q9WVI9 707 aa11.27□□□□□ -0.6
Trim9-201ENSMUST00000110520 Bin1O08539 588 aaKnown RBP11.27□□□□□ -0.61
Trim9-201ENSMUST00000110520 Znf335A2A5K6 1337 aa11.27□□□□□ -0.61
Trim9-201ENSMUST00000110520 TbcaP48428 108 aaKnown RBP11.27□□□□□ -0.61
Trim9-201ENSMUST00000110520 Adcy5P84309 1262 aa11.27□□□□□ -0.61
Trim9-201ENSMUST00000110520 Srek1Q8BZX4 494 aaKnown RBP11.27□□□□□ -0.61
Trim9-201ENSMUST00000110520 Myo5cE9Q1F5 1742 aa11.26□□□□□ -0.61
Trim9-201ENSMUST00000110520 Utp18Q5SSI6 552 aaKnown RBP11.26□□□□□ -0.61
Trim9-201ENSMUST00000110520 Cyp7a1Q64505 503 aa11.26□□□□□ -0.61
Trim9-201ENSMUST00000110520 Drc7Q6V3W6 876 aa11.26□□□□□ -0.61
Trim9-201ENSMUST00000110520 Lrrfip2Q91WK0 415 aa11.26□□□□□ -0.61
Trim9-201ENSMUST00000110520 Clasp1Q80TV8 1535 aaKnown RBP11.26□□□□□ -0.61
Trim9-201ENSMUST00000110520 Rufy2Q8R4C2 606 aa11.26□□□□□ -0.61
Trim9-201ENSMUST00000110520 Ubxn4Q8VCH8 506 aa11.26□□□□□ -0.61
Trim9-201ENSMUST00000110520 Mrps25Q9D125 171 aaKnown RBP11.26□□□□□ -0.61
Trim9-201ENSMUST00000110520 A0A0U1RNP2 1173 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms