RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Fkbp5Q64378 456 aa26.28■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Gnl3lQ6PGG6 577 aaKnown RBP26.28■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Nip7Q9CXK8 180 aaKnown RBP26.28■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Zbtb1Q91VL9 713 aa26.28■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Kif18aQ91WD7 886 aa26.28■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 FanclQ9CR14 375 aa26.28■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Pnmal2G3X9N3 661 aa26.26■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Ripor2Q80U16 1078 aa26.26■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Mcm2P97310 904 aa26.25■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 4930567H17RikQ3V0K5 233 aa26.24■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Trim30dE9PWL0 497 aa26.23■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Fam198bQ3UPI1 517 aa26.23■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Soga3Q6NZL0 945 aa26.23■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 KnstrnQ9D9Z1 312 aaKnown RBP26.23■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Mrc1Q61830 1456 aa26.23■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 AbraQ8BUZ1 375 aa26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 OscarQ8VBT3 265 aa26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Smarca5Q91ZW3 1051 aaKnown RBP26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Atg4a-psA0A0G2JFS9 396 aa26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Mcmdc2E9Q956 681 aa26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 AK157302I3ITR1 129 aa26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Slc4a10Q5DTL9 1118 aa26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Tgfb1i1Q62219 461 aa26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Slfnl1Q8BHW9 410 aa26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Atg4aQ8C9S8 396 aa26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Isca1Q9D924 129 aa26.22■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 C4bP01029 1738 aa26.21■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 NmiO35309 314 aa26.21■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Cwc25Q9DBF7 416 aa26.2■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Stard3nlQ9DCI3 235 aa26.2■■□□□ 1.79
Ccdc88a-202ENSMUST00000109477 Arap2Q8BZ05 1703 aa26.2■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Ccdc146E9Q9F7 977 aa26.19■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Lrrc43Q3V0L5 667 aa26.19■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Ehd4Q9EQP2 541 aa26.19■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Ltb4r2Q9JJL9 360 aa26.19■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Ccdc183A2AJB1 534 aa26.18■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Wdr63B2RY71 923 aa26.18■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Myd88P22366 296 aa26.18■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 VgfQ0VGU4 617 aa26.18■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Ezh2Q61188 746 aaKnown RBP26.18■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Ankib1Q6ZPS6 1085 aa26.18■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Rapgef4Q9EQZ6 1011 aa26.18■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Casz1Q9CWL2 1761 aa26.17■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Prr29B1ARI9 187 aa26.17■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Nlrp9bQ66X22 1003 aa26.17■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 MeiocA2AG06 965 aa26.17■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Gnat3Q3V3I2 354 aa26.17■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Cog6Q8R3I3 657 aa26.17■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Nlrp3Q8R4B8 1033 aa26.17■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 InsrrQ9WTL4 1300 aa26.16■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Lama4P97927 1816 aa26.15■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Prr5lA2AVJ5 370 aa26.15■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Cyp46a1Q9WVK8 500 aa26.15■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 RtcbQ99LF4 505 aaKnown RBP26.14■■□□□ 1.78
Ccdc88a-202ENSMUST00000109477 Hoxa7P02830 229 aa26.14■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 GpkowQ56A08 488 aa26.14■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Ssc5dQ8BV57 1371 aa26.13■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Kif23E9Q5G3 953 aa26.13■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Kiaa0232Q80U59 1396 aaKnown RBP26.13■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Fam213aQ9CYH2 218 aa26.12■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Akt1s1Q9D1F4 257 aa26.12■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Trip6Q9Z1Y4 480 aa26.12■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 NppbP40753 121 aa26.11■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Ipo8Q7TMY7 1010 aa26.11■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Ak7Q9D2H2 614 aa26.11■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Strn4P58404 760 aa26.1■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Cct4P80315 539 aaKnown RBP26.1■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 HmcesQ8R1M0 353 aaKnown RBP26.1■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Abcc4E9Q236 1325 aa26.1■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Pa2g4P50580 394 aaKnown RBP26.09■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Esco1Q69Z69 843 aa26.09■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Egfem1Q8C088 590 aa26.09■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Dpf1Q9QX66 387 aa26.09■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Ubr3Q5U430 1889 aa26.09■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Spata31d1bE9QA57 1361 aa26.09■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Ankrd31A0A140LI88 1765 aa26.08■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Fkbp1aP26883 108 aaKnown RBP26.08■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Atp1b3P97370 278 aa26.08■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Adam1aQ60813 791 aa26.08■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Smc4Q8CG47 1286 aa26.08■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Sumf1Q8R0F3 372 aa26.08■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Nsfl1cQ9CZ44 370 aaKnown RBP26.08■■□□□ 1.77
Ccdc88a-202ENSMUST00000109477 Fam71e1A1L3C1 212 aa26.08■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Zfyve9A2A8R0 1397 aa26.07■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Jdp2P97875 163 aa26.07■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 NexnQ7TPW1 607 aa26.07■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Tmem87bQ8BKU8 555 aa26.07■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Adora1Q60612 326 aa26.06■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Zbtb3Q91X45 518 aa26.06■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Amhr2Q8K592 568 aa26.05■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Ccdc85cE9Q6B2 420 aa26.05■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Slf2Q6P9P0 1278 aa26.05■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Srp68Q8BMA6 625 aaKnown RBP26.04■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Bcar3Q9QZK2 820 aa26.04■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Ttc19Q8CC21 365 aa26.03■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 VirmaA2AIV2 1811 aaKnown RBP26.03■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Snai1Q02085 264 aa26.02■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Zkscan2G3X952 960 aa26.02■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Ptpdc1Q6NZK8 747 aa26.02■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Clca2Q8BG22 942 aa26.02■■□□□ 1.76
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms