RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 4921504E06RikQ8CET2 560 aa18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Prex2Q3LAC4 1598 aa18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Gm10093D3YYI8 482 aa18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Hdac1O09106 482 aaKnown RBP18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Mtmr3Q8K296 1196 aa18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Slx4ipQ9D7Y9 413 aa18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Fam50bQ9WTJ8 334 aa18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Stat1P42225 749 aa18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Arhgef18Q6P9R4 1021 aa18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Iffo1Q8BXL9 562 aa18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Mrpl44Q9CY73 333 aaKnown RBP18.6■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Cnga2Q62398 664 aa18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 4930572O03RikQ8C5Y0 211 aa18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Ddx27Q921N6 760 aaKnown RBP18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Hdhd2Q3UGR5 259 aa18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Rbm19Q8R3C6 952 aaKnown RBP18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Ctnnbl1Q9CWL8 563 aaKnown RBP18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 DonsonQ9QXP4 560 aa18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Syt10Q9R0N4 523 aa18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Vps16Q920Q4 839 aa18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Smtnl1Q99LM3 459 aa18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Sil1Q9EPK6 465 aa18.59■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Cers3Q1A3B0 383 aa18.58■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Sf3b2Q3UJB0 878 aaKnown RBP18.58■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Tsg101Q61187 391 aa18.58■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Bloc1s4Q8VED2 215 aa18.58■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Riok1Q922Q2 567 aa18.58■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Ccdc94Q9D6J3 314 aa18.58■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Rapgef4Q9EQZ6 1011 aa18.58■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 NmiO35309 314 aa18.58■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 SfswapQ3USH5 945 aaKnown RBP18.58■□□□□ 0.57
Sptbn4-202ENSMUST00000108362 Tmx4Q8C0L0 335 aa18.58■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Mum1Q6DID5 682 aa18.58■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Soga3Q6NZL0 945 aa18.58■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Srgap1Q91Z69 1062 aa18.58■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Fam76aQ922G2 307 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 OvosQ3UU35 1456 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 RalgapbQ8BQZ4 1484 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Mapkbp1Q6NS57 1503 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Peg3Q3URU2 1571 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Akap2O54931 893 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Hook3Q8BUK6 718 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Adgrb2Q8CGM1 1561 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 VeztQ3ZK22 780 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Nap1l5Q9JJF0 156 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Wdr7Q920I9 1489 aa18.57■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Pik3r4Q8VD65 1358 aa18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Mcm10Q0VBD2 885 aa18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 NgdnQ9DB96 315 aaKnown RBP18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Nfxl1E9Q8I7 918 aaKnown RBP18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Ppfibp1Q8C8U0 969 aaKnown RBP18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Ppfia1B2RXQ2 1266 aa18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Ddx10Q80Y44 875 aaKnown RBP18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Dapk3O54784 448 aa18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Il4rP16382 810 aa18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Trap1aP19473 224 aa18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Ncbp1Q3UYV9 790 aaKnown RBP18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Ankrd40Q5SUE8 363 aa18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Tbc1d8Q9Z1A9 1134 aa18.56■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Uspl1Q3ULM6 1089 aa18.55■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Vps37dQ810I0 261 aa18.55■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Rai14Q9EP71 979 aaKnown RBP18.55■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Pde4bB1AWC9 736 aa18.55■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Zswim4Q8C7B8 1101 aa18.55■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Arhgef12Q8R4H2 1543 aaKnown RBP18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Ampd3O08739 766 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Chpf2Q3UU43 768 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Trim27Q62158 513 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Klhl30Q8C3F7 581 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Cfap53Q9D439 514 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Lmtk2Q3TYD6 1471 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Tyro3P55144 880 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 F2rP30558 430 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Syt1P46096 421 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Ccne1Q61457 408 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Brd3Q8K2F0 726 aaKnown RBP18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Ctdp1Q7TSG2 960 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Acbd3Q8BMP6 525 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Hip1rQ9JKY5 1068 aa18.54■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Arhgef40Q3UPH7 1517 aa18.53■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Api5O35841 504 aaKnown RBP18.53■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Ano6Q6P9J9 911 aa18.53■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Zfp251Q6PCX8 632 aa18.53■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Grpel1Q99LP6 217 aa18.53■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Pdia3P27773 505 aaKnown RBP18.53■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Eif3bQ8JZQ9 803 aaKnown RBP18.53■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Tex2Q6ZPJ0 1128 aaKnown RBP18.53■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Bicdl1A0JNT9 577 aa18.52■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Dnm1P39053 867 aa18.52■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Cdca8Q8BHX3 289 aa18.52■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Ssh2Q5SW75 1423 aa18.52■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 U2af1l4Q8BGJ9 220 aa18.52■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Kif21aQ9QXL2 1672 aa18.52■□□□□ 0.56
Sptbn4-202ENSMUST00000108362 Tbc1d2bQ3U0J8 965 aa18.52■□□□□ 0.55
Sptbn4-202ENSMUST00000108362 Ccdc148Q6P5U8 527 aa18.52■□□□□ 0.55
Sptbn4-202ENSMUST00000108362 Spata24Q6P926 205 aa18.52■□□□□ 0.55
Sptbn4-202ENSMUST00000108362 Prpf40aQ9R1C7 953 aaKnown RBP18.52■□□□□ 0.55
Sptbn4-202ENSMUST00000108362 Mug2P28666 1451 aa18.52■□□□□ 0.55
Sptbn4-202ENSMUST00000108362 Mrps27Q8BK72 415 aaKnown RBP18.51■□□□□ 0.55
Sptbn4-202ENSMUST00000108362 Krt23Q99PS0 422 aa18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms