RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Tnnc1P19123 161 aa17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Bcar3Q9QZK2 820 aa17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Uso1Q9Z1Z0 959 aaKnown RBP17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Map4k4P97820 1233 aaKnown RBP17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Cep63Q3UPP8 700 aa17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Speer4bQ9D9F7 267 aa17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 PalmQ9Z0P4 383 aa17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Aimp1P31230 310 aaKnown RBP17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Oas2E9Q9A9 742 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Trak2Q6P9N8 913 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Arfgap2Q99K28 520 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 WrnO09053 1401 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 SlmapQ3URD3 845 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Ift88Q61371 824 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Nek5Q7TSC3 627 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Prpf40aQ9R1C7 953 aaKnown RBP17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Cib2Q9Z309 187 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Il4rP16382 810 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Zpr1Q62384 459 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Fmnl3Q6ZPF4 1028 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Matr3Q8K310 846 aaKnown RBP17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Gys2Q8VCB3 704 aa17.25■□□□□ 0.35
Shank1-202ENSMUST00000107935 Tyro3P55144 880 aa17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Tubb5P99024 444 aaKnown RBP17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Sec62Q8BU14 398 aaKnown RBP17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Cacna2d3Q9Z1L5 1091 aa17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Zfp644E9QA22 1323 aa17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Zfp853A0A1D5RM95 733 aa17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Tmx3Q8BXZ1 456 aa17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 VimP20152 466 aaKnown RBP17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Sem1P60897 70 aa17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Cep19Q9CQA8 163 aa17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Tacc3Q9JJ11 631 aa17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Slc26a8Q8R0C3 999 aa17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Setdb1O88974 1307 aa17.24■□□□□ 0.35
Shank1-202ENSMUST00000107935 Btn2a2A4QPC6 514 aa17.23■□□□□ 0.35
Shank1-202ENSMUST00000107935 TatQ8QZR1 454 aa17.23■□□□□ 0.35
Shank1-202ENSMUST00000107935 Ncoa2Q61026 1462 aa17.23■□□□□ 0.35
Shank1-202ENSMUST00000107935 Catsper2A2ARP9 588 aa17.23■□□□□ 0.35
Shank1-202ENSMUST00000107935 Q4VA45 678 aa17.23■□□□□ 0.35
Shank1-202ENSMUST00000107935 LlphQ9D945 130 aaKnown RBP17.23■□□□□ 0.35
Shank1-202ENSMUST00000107935 Bicd1Q8BR07 835 aa17.23■□□□□ 0.35
Shank1-202ENSMUST00000107935 Tmco5aQ9D9D5 303 aa17.23■□□□□ 0.35
Shank1-202ENSMUST00000107935 Kank1E9Q238 1360 aa17.23■□□□□ 0.35
Shank1-202ENSMUST00000107935 Stmn2P55821 179 aa17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 EappQ5BU09 281 aa17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 Ggnbp2Q5SV77 696 aa17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 Eif2aQ8BJW6 581 aaKnown RBP17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 Ppp1r42Q8R1Z4 357 aa17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 Tpx2A2APB8 745 aaKnown RBP17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 Cetn1P41209 172 aa17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 EsrrbQ61539 433 aa17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 Nup133Q8R0G9 1155 aa17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 Apol7aB2RT54 418 aa17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 Brd2Q7JJ13 798 aaKnown RBP17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 Rimbp2Q80U40 1072 aa17.22■□□□□ 0.35
Shank1-202ENSMUST00000107935 Atp2b1G5E829 1220 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 B4galnt4Q766D5 1034 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Apbb1ipQ8R5A3 670 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Cacna2d4Q5RJF7 1116 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Trim6Q8BGE7 488 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Ift74Q8BKE9 600 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Uchl5Q9WUP7 329 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Ptgs1P22437 602 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Ttll12Q3UDE2 639 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Drc1Q3USS3 753 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Igsf3Q6ZQA6 1194 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Tshz3Q8CGV9 1081 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Smg7Q5RJH6 1138 aaKnown RBP17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Kiaa1328Q6NZK5 612 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Ubxn1Q922Y1 297 aa17.21■□□□□ 0.35
Shank1-202ENSMUST00000107935 Ccdc170D3YXL0 722 aa17.21■□□□□ 0.34
Shank1-202ENSMUST00000107935 Bloc1s4Q8VED2 215 aa17.21■□□□□ 0.34
Shank1-202ENSMUST00000107935 Riok1Q922Q2 567 aa17.21■□□□□ 0.34
Shank1-202ENSMUST00000107935 Letm1Q9Z2I0 738 aa17.21■□□□□ 0.34
Shank1-202ENSMUST00000107935 Sos1Q62245 1319 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Zkscan4Q5SZT6 480 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Adcy3Q8VHH7 1145 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Capza3P70190 299 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Dact3Q0PHV7 610 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Ttc21aQ8C0S4 1314 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 RragbQ6NTA4 374 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Krt7Q9DCV7 457 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Samd15F6XZJ7 620 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Ccdc57Q6PHN1 1016 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Krt23Q99PS0 422 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 HnrnpmQ9D0E1 729 aaKnown RBP17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Rai14Q9EP71 979 aaKnown RBP17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Egfl6Q9JJZ5 550 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Ube3aO08759 870 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Kif5cP28738 956 aaKnown RBP17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Frat1P70339 274 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Ndufab1Q9CR21 156 aa17.2■□□□□ 0.34
Shank1-202ENSMUST00000107935 Krt8P11679 490 aaKnown RBP17.19■□□□□ 0.34
Shank1-202ENSMUST00000107935 Ccdc162pQ0VG85 912 aa17.19■□□□□ 0.34
Shank1-202ENSMUST00000107935 Ttc19Q8CC21 365 aa17.19■□□□□ 0.34
Shank1-202ENSMUST00000107935 MycbpQ9EQS3 103 aa17.19■□□□□ 0.34
Shank1-202ENSMUST00000107935 Tdrd9Q14BI7 1383 aa17.19■□□□□ 0.34
Shank1-202ENSMUST00000107935 Pabpn1Q8CCS6 302 aaKnown RBP17.19■□□□□ 0.34
Shank1-202ENSMUST00000107935 DesP31001 469 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 55.7 ms