RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Ripply1Q2WG77 201 aa8.65□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Mrps27Q8BK72 415 aaKnown RBP8.65□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gm45015A0A140LII9 184 aa8.65□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gm18336A0A140LIU8 765 aa8.65□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Cnksr1A2A9K7 700 aa8.65□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Kif4P33174 1231 aa8.65□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Anp32cQ64G17 123 aa8.65□□□□□ -1.02
Clrn1-202ENSMUST00000055636 NexnQ7TPW1 607 aa8.65□□□□□ -1.02
Clrn1-202ENSMUST00000055636 4930572O03RikQ8C5Y0 211 aa8.65□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Dlg5E9Q9R9 1921 aa8.65□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Pa2g4P50580 394 aaKnown RBP8.65□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Zbtb45Q52KG4 520 aa8.65□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Erc2Q6PH08 957 aa8.65□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Rps6ka5Q8C050 863 aa8.65□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Gli3Q61602 1583 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Adcy9P51830 1353 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Zfp142G5E869 1843 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 NcapgE9PWG6 1004 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 HdgfP51859 237 aaKnown RBP8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Tgfb1i1Q62219 461 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Tshz2Q68FE9 1030 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Mum1Q6DID5 682 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Bend3Q6PAL0 825 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Cadps2Q8BYR5 1297 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Efcab2Q9CQ46 164 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Nphp1Q9QY53 687 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Wdr78E9PYY5 807 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Bicc1Q99MQ1 977 aaKnown RBP8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Echdc1Q9D9V3 322 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Cyp46a1Q9WVK8 500 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Abcc12Q80WJ6 1366 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Myo5bP21271 1818 aa8.64□□□□□ -1.03
Clrn1-202ENSMUST00000055636 PsapQ61207 557 aaKnown RBP8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Taf7Q9R1C0 341 aa8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Phactr2B1AVP0 632 aa8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Hmox1P14901 289 aa8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Irf9Q61179 399 aa8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Olfml1Q8BSH2 233 aa8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Tshz3Q8CGV9 1081 aa8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Edc3Q8K2D3 508 aaKnown RBP8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 PtmsQ9D0J8 101 aaKnown RBP8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 TefQ9JLC6 301 aa8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Atp10bB1AWN4 1474 aa8.63□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Bach2P97303 839 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Atp8b2P98199 1209 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Kank4Q6P9J5 1016 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Ints5Q8CHT3 1018 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Eif3bQ8JZQ9 803 aaKnown RBP8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Inpp5bQ8K337 993 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 RestQ8VIG1 1082 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Lmbr1lQ9D1E5 489 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Rnf123Q5XPI3 1314 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Mmp8O70138 465 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Ncbp1Q3UYV9 790 aaKnown RBP8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Ier5O89113 308 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Iqsec3Q3TES0 1195 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Nol12Q8BG17 217 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Dmrt2Q8BG36 561 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Eno4Q8C042 619 aa8.62□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Plekhd1B2RPU2 505 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Ptgs1P22437 602 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Ccnl1Q52KE7 532 aaKnown RBP8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Ggt6Q6PDE7 497 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Naa30Q8CES0 364 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Fbxo3Q9DC63 480 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Qtrt2B8ZXI1 415 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 NmiO35309 314 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Ets1P27577 440 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 EvcP57680 1005 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Adam1aQ60813 791 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Tbc1d31Q6NXY1 996 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Fbxo2Q80UW2 297 aa8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 LlphQ9D945 130 aaKnown RBP8.61□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Tbc1d30Q69ZT9 766 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Znf526Q8BI66 675 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Psrc1Q9D0P7 329 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Pard3Q99NH2 1333 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Slit1Q80TR4 1531 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Filip1lQ6P6L0 1131 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Tns2Q8CGB6 1400 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 ApobrQ8VBT6 942 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Grpel1Q99LP6 217 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Cap2Q9CYT6 476 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Bcl2l12Q9D3J3 255 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Ccdc94Q9D6J3 314 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Stk3Q9JI10 497 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Sytl4Q9R0Q1 673 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Cavin1O54724 392 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Igflr1Q3U4N7 345 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Ptpdc1Q6NZK8 747 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Serpina10Q8R121 448 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Dnajc14Q921R4 703 aa8.6□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Col4a1P02463 1669 aa8.59□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Syde2E9PUP1 1314 aa8.59□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Tpx2A2APB8 745 aaKnown RBP8.59□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Tnnt2P50752 301 aa8.59□□□□□ -1.03
Clrn1-202ENSMUST00000055636 ZgpatQ8VDM1 511 aa8.59□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Rbm42Q91V81 474 aaKnown RBP8.59□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Glipr1l2Q9CQ35 332 aa8.59□□□□□ -1.03
Clrn1-202ENSMUST00000055636 Abca15E9PWH4 1668 aa8.59□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms