RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Lmod1Q8BVA4 595 aa21.37■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Tceanc2Q8R2M0 207 aa21.37■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Vamp4O70480 141 aa21.37■■□□□ 1.01
Scaf11-201ENSMUST00000047835 CalcaP70160 136 aa21.37■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Lrrc45Q8CIM1 670 aa21.37■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Slu7Q8BHJ9 585 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Larp6Q8BN59 492 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Tmem143Q8VD26 458 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Fam213aQ9CYH2 218 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Anapc15-psA0A140T8L6 141 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Tmem266Q8BZB3 538 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Glg1Q61543 1175 aaKnown RBP21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Nol7Q9D7Z3 254 aaKnown RBP21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Letm1Q9Z2I0 738 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Jdp2P97875 163 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Cep112Q5PR68 954 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Cdan1Q8CC12 1239 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Nap1l5Q9JJF0 156 aa21.36■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Rusc2Q80U22 1514 aa21.35■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Rad23bP54728 416 aa21.35■■□□□ 1.01
Scaf11-201ENSMUST00000047835 CrklP47941 303 aa21.35■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Stxbp4Q9WV89 557 aa21.35■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Pola1P33609 1465 aa21.35■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Wdr33Q8K4P0 1330 aaKnown RBP21.35■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Prkab2Q6PAM0 271 aa21.35■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Ddx17Q501J6 650 aaKnown RBP21.35■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Metap2O08663 478 aaKnown RBP21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Nkx1-2P42580 305 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Lrrfip1Q3UZ39 729 aaKnown RBP21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Ift74Q8BKE9 600 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Bicc1Q99MQ1 977 aaKnown RBP21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Atf7ipQ7TT18 1306 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Casp1P29452 402 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 GlmnQ8BZM1 596 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Lrrfip2Q91WK0 415 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 CenpqQ9CPQ5 267 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Erich3F6QRE9 1637 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 PtprgQ05909 1442 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 IbspQ61711 324 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Q9D5Q8 446 aa21.34■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Cul5Q9D5V5 780 aa21.33■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Slc4a4O88343 1079 aa21.33■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Txndc16Q7TN22 820 aa21.33■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Slc39a6Q8C145 765 aa21.33■■□□□ 1.01
Scaf11-201ENSMUST00000047835 CenphQ9QYM8 241 aa21.33■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Kif3cO35066 796 aa21.33■■□□□ 1
Scaf11-201ENSMUST00000047835 Cers3Q1A3B0 383 aa21.33■■□□□ 1
Scaf11-201ENSMUST00000047835 Triml1Q8BVP1 470 aa21.33■■□□□ 1
Scaf11-201ENSMUST00000047835 Fam160b2Q80YR2 744 aa21.32■■□□□ 1
Scaf11-201ENSMUST00000047835 Znf131Q8K3J5 619 aa21.32■■□□□ 1
Scaf11-201ENSMUST00000047835 IntuQ059U7 942 aa21.32■■□□□ 1
Scaf11-201ENSMUST00000047835 Ncf1Q09014 390 aa21.32■■□□□ 1
Scaf11-201ENSMUST00000047835 Cadps2Q8BYR5 1297 aa21.32■■□□□ 1
Scaf11-201ENSMUST00000047835 Stx6Q9JKK1 255 aa21.32■■□□□ 1
Scaf11-201ENSMUST00000047835 Cnot6lQ8VEG6 555 aa21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 Luc7lQ9CYI4 371 aaKnown RBP21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 Qtrt2B8ZXI1 415 aa21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 Usp5P56399 858 aaKnown RBP21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 MthfsQ9D110 203 aa21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 Sil1Q9EPK6 465 aa21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 Homer1Q9Z2Y3 366 aa21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 PzpQ61838 1495 aa21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 Rasa1E9PYG6 1038 aa21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 LyarQ08288 388 aaKnown RBP21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 Cacna2d4Q5RJF7 1116 aa21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 Sde2Q8K1J5 448 aaKnown RBP21.31■■□□□ 1
Scaf11-201ENSMUST00000047835 Anp32eP97822 260 aaKnown RBP21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Fez1Q8K0X8 392 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Dydc2Q9D3X8 139 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Mast1Q9R1L5 1570 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Nlgn1Q99K10 843 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Mrpl44Q9CY73 333 aaKnown RBP21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 AatkQ80YE4 1365 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Cpsf1Q9EPU4 1441 aaKnown RBP21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Slc1a4O35874 532 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Msl1Q6PDM1 616 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Dph6Q9CQ28 267 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Terf2O35144 541 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 SympkQ80X82 1284 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Tmc2Q8R4P4 888 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Hmg20bQ9Z104 317 aa21.3■■□□□ 1
Scaf11-201ENSMUST00000047835 Rbm8a2A0A0N4SUH6 174 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Bin1O08539 588 aaKnown RBP21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 ItpripQ3TNL8 555 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Rbm10Q99KG3 930 aaKnown RBP21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Rbm8aQ9CWZ3 174 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Cep120Q7TSG1 988 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Nckap5lQ6GQX2 1323 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Stat1P42225 749 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Ccdc150Q8CDI7 1110 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 DymQ8CHY3 669 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Nat10Q8K224 1024 aaKnown RBP21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 KdrP35918 1367 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Idi1P58044 227 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Ppp4r3aQ6P2K6 820 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Nphp3Q7TNH6 1325 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Myl6bQ8CI43 207 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Phldb2Q8K1N2 1249 aa21.29■■□□□ 1
Scaf11-201ENSMUST00000047835 Hfm1D3Z4R1 1434 aa21.28■■□□□ 1
Scaf11-201ENSMUST00000047835 Lmtk2Q3TYD6 1471 aa21.28■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms