RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Uggt1Q6P5E4 1551 aa17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 Syce3B5KM66 88 aa17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 Fam160b2Q80YR2 744 aa17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 Ttc5Q99LG4 440 aa17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 Bicc1Q99MQ1 977 aaKnown RBP17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 Gm10093D3YYI8 482 aa17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 Hdac1O09106 482 aaKnown RBP17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 Rbm26Q6NZN0 1012 aaKnown RBP17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 IkQ9Z1M8 557 aaKnown RBP17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 ImpactO55091 318 aa17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 Myo3aQ8K3H5 1613 aa17.85■□□□□ 0.45
Usp38-201ENSMUST00000042724 Kdm6aO70546 1401 aa17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 Ppp1r21Q3TDD9 780 aa17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 Ddx46Q569Z5 1032 aaKnown RBP17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 Ankrd13dQ6PD24 605 aa17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 Phkg2Q9DB30 406 aa17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 Mbd5B1AYB6 1498 aa17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 Limch1Q3UH68 1057 aa17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 SympkQ80X82 1284 aa17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 Necab1Q8BG18 352 aa17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 Pa2g4P50580 394 aaKnown RBP17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 Atp2b3Q0VF55 1220 aa17.84■□□□□ 0.45
Usp38-201ENSMUST00000042724 Rims1Q99NE5 1463 aa17.83■□□□□ 0.45
Usp38-201ENSMUST00000042724 Nup133Q8R0G9 1155 aa17.83■□□□□ 0.45
Usp38-201ENSMUST00000042724 Zfyve16Q80U44 1528 aa17.83■□□□□ 0.45
Usp38-201ENSMUST00000042724 Slc14a2Q8R4T9 930 aa17.83■□□□□ 0.45
Usp38-201ENSMUST00000042724 Pmfbp1Q9WVQ0 1022 aa17.83■□□□□ 0.45
Usp38-201ENSMUST00000042724 Nckap5lQ6GQX2 1323 aa17.83■□□□□ 0.44
Usp38-201ENSMUST00000042724 Mybbp1aQ7TPV4 1344 aaKnown RBP17.83■□□□□ 0.44
Usp38-201ENSMUST00000042724 Rai14Q9EP71 979 aaKnown RBP17.83■□□□□ 0.44
Usp38-201ENSMUST00000042724 Lmbr1Q9JIT0 490 aa17.83■□□□□ 0.44
Usp38-201ENSMUST00000042724 Taf3Q5HZG4 932 aa17.83■□□□□ 0.44
Usp38-201ENSMUST00000042724 Prkab2Q6PAM0 271 aa17.83■□□□□ 0.44
Usp38-201ENSMUST00000042724 Arhgap23Q69ZH9 1483 aa17.82■□□□□ 0.44
Usp38-201ENSMUST00000042724 Mrps27Q8BK72 415 aaKnown RBP17.81■□□□□ 0.44
Usp38-201ENSMUST00000042724 Adgrl1Q80TR1 1466 aa17.81■□□□□ 0.44
Usp38-201ENSMUST00000042724 Gcom1E9PZ54 550 aa17.81■□□□□ 0.44
Usp38-201ENSMUST00000042724 Nucb1Q02819 459 aaKnown RBP17.81■□□□□ 0.44
Usp38-201ENSMUST00000042724 MyzapQ3UIJ9 466 aa17.81■□□□□ 0.44
Usp38-201ENSMUST00000042724 Ccdc39Q9D5Y1 937 aa17.81■□□□□ 0.44
Usp38-201ENSMUST00000042724 Neurl4Q5NCX5 1563 aa17.81■□□□□ 0.44
Usp38-201ENSMUST00000042724 Igflr1Q3U4N7 345 aa17.81■□□□□ 0.44
Usp38-201ENSMUST00000042724 Bag4Q8CI61 457 aa17.81■□□□□ 0.44
Usp38-201ENSMUST00000042724 Myom2Q14BI5 1463 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 Ces1hD3Z298 562 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 Aifm3Q3TY86 605 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 Ncoa4Q5U4H9 625 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 Stk36Q69ZM6 1316 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 Rasa1E9PYG6 1038 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 Snap23O09044 210 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 Rlbp1Q9Z275 317 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 Zbtb3Q91X45 518 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 NsmfQ99NF2 532 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 Stx6Q9JKK1 255 aa17.8■□□□□ 0.44
Usp38-201ENSMUST00000042724 Dhx8A2A4P0 1244 aaKnown RBP17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 SrrtQ99MR6 875 aaKnown RBP17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 Wdr33Q8K4P0 1330 aaKnown RBP17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 Ccdc158Q8CDI6 1109 aa17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 NhsB1AV60 1647 aa17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 Gm7347D3YYI9 267 aa17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 Speer4aF8VPX6 267 aa17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 Mmp8O70138 465 aa17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 Uhrf1bp1lA2RSJ4 1457 aa17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 Rdm1Q9CQK3 281 aa17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 SelenooQ9DBC0 667 aa17.79■□□□□ 0.44
Usp38-201ENSMUST00000042724 Kiaa1107Q80TK0 1369 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Rbm8a2A0A0N4SUH6 174 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Pip4k2aO70172 405 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Stim1P70302 685 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Tango6Q8C3S2 1079 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Rbm8aQ9CWZ3 174 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Slc39a6Q8C145 765 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Iqca1Q9CUL5 857 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Trpm2Q91YD4 1506 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Dusp9Q7TNL7 452 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Tmem143Q8VD26 458 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Galntl5Q9D4M9 431 aa17.78■□□□□ 0.44
Usp38-201ENSMUST00000042724 Cct2P80314 535 aaKnown RBP17.77■□□□□ 0.44
Usp38-201ENSMUST00000042724 Hand2Q61039 217 aa17.77■□□□□ 0.44
Usp38-201ENSMUST00000042724 Trim11Q99PQ2 467 aa17.77■□□□□ 0.44
Usp38-201ENSMUST00000042724 Pdzd9Q9D9M4 266 aa17.77■□□□□ 0.44
Usp38-201ENSMUST00000042724 Cnksr1A2A9K7 700 aa17.77■□□□□ 0.44
Usp38-201ENSMUST00000042724 Atg3Q9CPX6 314 aa17.77■□□□□ 0.44
Usp38-201ENSMUST00000042724 Map7d2A2AG50 781 aa17.77■□□□□ 0.44
Usp38-201ENSMUST00000042724 Cdkn1cP49919 348 aa17.77■□□□□ 0.43
Usp38-201ENSMUST00000042724 Morc2aQ69ZX6 1030 aa17.77■□□□□ 0.43
Usp38-201ENSMUST00000042724 Usp19Q3UJD6 1360 aa17.77■□□□□ 0.43
Usp38-201ENSMUST00000042724 Clasp1Q80TV8 1535 aaKnown RBP17.76■□□□□ 0.43
Usp38-201ENSMUST00000042724 Abca8bQ8K440 1620 aa17.76■□□□□ 0.43
Usp38-201ENSMUST00000042724 Kdm5aQ3UXZ9 1690 aa17.76■□□□□ 0.43
Usp38-201ENSMUST00000042724 FancaQ9JL70 1439 aa17.76■□□□□ 0.43
Usp38-201ENSMUST00000042724 Pet2A2AHY8 747 aa17.76■□□□□ 0.43
Usp38-201ENSMUST00000042724 Rad50P70388 1312 aa17.76■□□□□ 0.43
Usp38-201ENSMUST00000042724 Stat1P42225 749 aa17.76■□□□□ 0.43
Usp38-201ENSMUST00000042724 RarsQ9D0I9 660 aaKnown RBP17.76■□□□□ 0.43
Usp38-201ENSMUST00000042724 Eif5P59325 429 aaKnown RBP17.76■□□□□ 0.43
Usp38-201ENSMUST00000042724 Ercc6lQ8BHK9 1240 aa17.76■□□□□ 0.43
Usp38-201ENSMUST00000042724 LyarQ08288 388 aaKnown RBP17.75■□□□□ 0.43
Usp38-201ENSMUST00000042724 Ccdc66Q6NS45 935 aa17.75■□□□□ 0.43
Usp38-201ENSMUST00000042724 Pm20d1Q8C165 503 aa17.75■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms