RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Pard3Q99NH2 1333 aa25.1■■□□□ 1.61
Cdx1-201ENSMUST00000025521 InsrrQ9WTL4 1300 aa25.09■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Ripor2Q80U16 1078 aa25.09■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Smarce1O54941 411 aaKnown RBP25.08■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Atp6v1dP57746 247 aa25.08■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Sf3a1Q8K4Z5 791 aaKnown RBP25.08■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Tbc1d4Q8BYJ6 1307 aa25.07■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Plcb2A3KGF7 1181 aa25.07■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Cers3Q1A3B0 383 aa25.07■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Brf1Q8CFK2 676 aa25.07■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Ccdc7Q9D541 371 aa25.07■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Gm21680A0A0G2JGR8 267 aa25.06■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Tmem87bQ8BKU8 555 aa25.06■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Ints5Q8CHT3 1018 aa25.06■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Sipa1l3G3X9J0 1776 aa25.06■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Akap11E9Q777 1895 aa25.06■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Zbtb40Q6PCS8 1258 aa25.05■■□□□ 1.6
Cdx1-201ENSMUST00000025521 NexnQ7TPW1 607 aa25.05■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Slc39a6Q8C145 765 aa25.05■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Dmrtc1Q9D9R7 182 aa25.05■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Mrc1Q61830 1456 aa25.05■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Stk11ipQ3TAA7 1072 aa25.05■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Ric1Q69ZJ7 1422 aa25.05■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Ppfia1B2RXQ2 1266 aa25.04■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Isy1Q69ZQ2 285 aaKnown RBP25.04■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Bloc1s4Q8VED2 215 aa25.04■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Bag4Q8CI61 457 aa25.03■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Jakmip1Q8BVL9 626 aa25.03■■□□□ 1.6
Cdx1-201ENSMUST00000025521 KinQ8K339 391 aa25.03■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Casz1Q9CWL2 1761 aa25.02■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Utp18Q5SSI6 552 aaKnown RBP25.02■■□□□ 1.6
Cdx1-201ENSMUST00000025521 Syde2E9PUP1 1314 aa25.01■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Strn4P58404 760 aa25.01■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Gnat3Q3V3I2 354 aa25.01■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Filip1lQ6P6L0 1131 aa25.01■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Stk3Q9JI10 497 aa25.01■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Col4a1P02463 1669 aa25.01■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Fkbp5Q64378 456 aa25■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Rhot2Q8JZN7 620 aa25■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Bag3Q9JLV1 577 aaKnown RBP25■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Top1mtQ8R4U6 593 aa25■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Crb1Q8VHS2 1405 aa24.99■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Abca3Q8R420 1704 aa24.99■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Ddx19aQ61655 478 aaKnown RBP24.99■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Ints3Q7TPD0 1041 aaKnown RBP24.99■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Tshz3Q8CGV9 1081 aa24.99■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Mylk2Q8VCR8 613 aa24.99■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Nav1Q8CH77 1875 aa24.98■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Hspa2P17156 633 aa24.98■■□□□ 1.59
Cdx1-201ENSMUST00000025521 EvcP57680 1005 aa24.98■■□□□ 1.59
Cdx1-201ENSMUST00000025521 GpkowQ56A08 488 aa24.98■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Pdzrn3Q69ZS0 1063 aa24.98■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Soga3Q6NZL0 945 aa24.98■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Mlh1Q9JK91 760 aa24.98■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Add2Q9QYB8 725 aa24.98■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Slc26a8Q8R0C3 999 aa24.98■■□□□ 1.59
Cdx1-201ENSMUST00000025521 AtrnQ9WU60 1428 aa24.98■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Phactr2B1AVP0 632 aa24.97■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Irx3P81067 507 aa24.97■■□□□ 1.59
Cdx1-201ENSMUST00000025521 EspnlQ3UYR4 1005 aa24.97■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Ehd4Q9EQP2 541 aa24.97■■□□□ 1.59
Cdx1-201ENSMUST00000025521 NmiO35309 314 aa24.96■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Zdhhc9P59268 364 aa24.96■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Adora1Q60612 326 aa24.96■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Ddx11Q6AXC6 880 aa24.96■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Acsbg1Q99PU5 721 aa24.96■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Kat6bQ8BRB7 1872 aa24.96■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Ets1P27577 440 aa24.95■■□□□ 1.59
Cdx1-201ENSMUST00000025521 AbraQ8BUZ1 375 aa24.95■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Edc3Q8K2D3 508 aaKnown RBP24.95■■□□□ 1.59
Cdx1-201ENSMUST00000025521 Rasa1E9PYG6 1038 aa24.95■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Lrp6O88572 1613 aa24.94■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Arap2Q8BZ05 1703 aa24.94■■□□□ 1.58
Cdx1-201ENSMUST00000025521 AK157302I3ITR1 129 aa24.94■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Ppp4r3aQ6P2K6 820 aa24.94■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Isca1Q9D924 129 aa24.94■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Gm45015A0A140LII9 184 aa24.93■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Gm18336A0A140LIU8 765 aa24.93■■□□□ 1.58
Cdx1-201ENSMUST00000025521 St18Q80TY4 1045 aa24.93■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Kcnh4A2A5F7 1018 aa24.93■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Nlrp1aQ2LKU9 1182 aa24.93■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Ifit2Q64112 472 aa24.93■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Zeb2Q9R0G7 1215 aa24.93■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Nphp3Q7TNH6 1325 aa24.92■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Slx4ipQ9D7Y9 413 aa24.92■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Cwc25Q9DBF7 416 aa24.92■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Stard3nlQ9DCI3 235 aa24.92■■□□□ 1.58
Cdx1-201ENSMUST00000025521 1700006A11RikB9EHI3 544 aa24.91■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Tnrc6cQ3UHC0 1690 aaKnown RBP24.91■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Ubxn10Q8BG34 277 aa24.91■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Gdpd2Q9ESM6 539 aa24.91■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Sos2Q02384 1333 aa24.89■■□□□ 1.58
Cdx1-201ENSMUST00000025521 Prl3d3A0A0M6L0J6 224 aa24.89■■□□□ 1.57
Cdx1-201ENSMUST00000025521 Spryd3E9Q9B3 442 aa24.89■■□□□ 1.57
Cdx1-201ENSMUST00000025521 Gjb2Q00977 226 aa24.89■■□□□ 1.57
Cdx1-201ENSMUST00000025521 Rbm27Q5SFM8 1060 aaKnown RBP24.89■■□□□ 1.57
Cdx1-201ENSMUST00000025521 Q8C5K5 320 aa24.89■■□□□ 1.57
Cdx1-201ENSMUST00000025521 Mybbp1aQ7TPV4 1344 aaKnown RBP24.88■■□□□ 1.57
Cdx1-201ENSMUST00000025521 Kcnb2A6H8H5 907 aa24.88■■□□□ 1.57
Cdx1-201ENSMUST00000025521 ImpactO55091 318 aa24.88■■□□□ 1.57
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms