RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Chmp7Q8R1T1 451 aa13.29□□□□□ -0.28
Ldb3-202ENSMUST00000022328 PtmsQ9D0J8 101 aaKnown RBP13.29□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Iqsec3Q3TES0 1195 aa13.28□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Pmfbp1Q9WVQ0 1022 aa13.28□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Abcc4E9Q236 1325 aa13.28□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Rasa1E9PYG6 1038 aa13.28□□□□□ -0.28
Ldb3-202ENSMUST00000022328 BccipQ9CWI3 316 aa13.28□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Ush1cQ9ES64 910 aa13.28□□□□□ -0.28
Ldb3-202ENSMUST00000022328 NexnQ7TPW1 607 aa13.27□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Tnks1bp1P58871 1720 aa13.27□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Ms4a2P20490 235 aa13.27□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Zdhhc9P59268 364 aa13.27□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Ddx17Q501J6 650 aaKnown RBP13.27□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Mkrn3Q60764 544 aa13.27□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Tmx3Q8BXZ1 456 aa13.27□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Grm8P47743 908 aa13.26□□□□□ -0.29
Ldb3-202ENSMUST00000022328 IbspQ61711 324 aa13.26□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Zranb3Q6NZP1 1069 aa13.26□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Ppm1mQ8BU27 406 aa13.26□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Kiaa0232Q80U59 1396 aaKnown RBP13.26□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Brpf1B2RRD7 1212 aa13.25□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Atp6v1dP57746 247 aa13.25□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Bicc1Q99MQ1 977 aaKnown RBP13.25□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Tshz3Q8CGV9 1081 aa13.25□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Fez1Q8K0X8 392 aa13.25□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Rapgef3Q8VCC8 918 aa13.25□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Slit1Q80TR4 1531 aa13.25□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Rad50P70388 1312 aa13.25□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Smarce1O54941 411 aaKnown RBP13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Jakmip1Q8BVL9 626 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Ssfa2Q922B9 1252 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Erich6bQ9D4S6 220 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Ccdc7Q9D541 371 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Bcl9lQ67FY2 1494 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Phactr2B1AVP0 632 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Pa2g4P50580 394 aaKnown RBP13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Fam228bQ497Q6 232 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Filip1lQ6P6L0 1131 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Zbtb3Q91X45 518 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 TefQ9JLC6 301 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 FocadA2AKG8 1798 aa13.24□□□□□ -0.29
Ldb3-202ENSMUST00000022328 EvcP57680 1005 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Asic4Q7TNS7 539 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 4930572O03RikQ8C5Y0 211 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Brf1Q8CFK2 676 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Taf5lQ91WQ5 589 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Dhx30Q99PU8 1217 aaKnown RBP13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Gdpd2Q9ESM6 539 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Ubr2Q6WKZ8 1755 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Igfbp6P47880 238 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Utp18Q5SSI6 552 aaKnown RBP13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Pde3bQ61409 1100 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 KinQ8K339 391 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Gtf3c5Q8R2T8 520 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Lmbr1lQ9D1E5 489 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Stk3Q9JI10 497 aa13.23□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Becn1O88597 448 aa13.22□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Pdzrn3Q69ZS0 1063 aa13.22□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Shank2Q80Z38 1476 aa13.22□□□□□ -0.29
Ldb3-202ENSMUST00000022328 ImpactO55091 318 aa13.22□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Strn4P58404 760 aa13.22□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Cnnm1Q0GA42 951 aa13.22□□□□□ -0.29
Ldb3-202ENSMUST00000022328 RgmbQ7TQ33 436 aa13.22□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Mlh1Q9JK91 760 aa13.22□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Fam50bQ9WTJ8 334 aa13.22□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Gm45015A0A140LII9 184 aa13.21□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Gm18336A0A140LIU8 765 aa13.21□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Tjp1P39447 1745 aaKnown RBP13.21□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Ddx60E9PZQ1 1711 aa13.21□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Ppfia1B2RXQ2 1266 aa13.21□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Ddx19aQ61655 478 aaKnown RBP13.21□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Prkab2Q6PAM0 271 aa13.21□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Spock2Q9ER58 423 aa13.21□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Zbtb12Q9Z150 459 aa13.21□□□□□ -0.29
Ldb3-202ENSMUST00000022328 Ints3Q7TPD0 1041 aaKnown RBP13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 St18Q80TY4 1045 aa13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Amigo3Q8C2S7 508 aa13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Eif3bQ8JZQ9 803 aaKnown RBP13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 DccP70211 1447 aa13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Ttll7A4Q9F0 912 aa13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 EspnlQ3UYR4 1005 aa13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Nlrp9bQ66X22 1003 aa13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Sf3a1Q8K4Z5 791 aaKnown RBP13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Slx4ipQ9D7Y9 413 aa13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Add2Q9QYB8 725 aa13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Abca15E9PWH4 1668 aa13.2□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Top1mtQ8R4U6 593 aa13.19□□□□□ -0.3
Ldb3-202ENSMUST00000022328 PigbQ9JJQ0 542 aa13.19□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Plekhd1B2RPU2 505 aa13.19□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Tnnt2P50752 301 aa13.19□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Gys2Q8VCB3 704 aa13.19□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Pnma3Q8JZW8 466 aa13.18□□□□□ -0.3
Ldb3-202ENSMUST00000022328 MypnQ5DTJ9 1315 aa13.18□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Vsig10D3YX43 558 aa13.18□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Gzf1Q4VBD9 706 aa13.18□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Ripor2Q80U16 1078 aa13.17□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Edc3Q8K2D3 508 aaKnown RBP13.17□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Elmsan1E9Q2I4 1089 aaKnown RBP13.17□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Ets1P27577 440 aa13.17□□□□□ -0.3
Ldb3-202ENSMUST00000022328 Gjb2Q00977 226 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 131.2 ms