RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 SLAMF1Q13291 335 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 DDX39BQ13838 428 aaKnown RBP10.31□□□□□ -0.76
TARDBP-221ENST00000619555 TESK1Q15569 626 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 PIGGQ5H8A4 983 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 DEPDC1Q5TB30 811 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 NDUFAF5Q5TEU4 345 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 KHDRBS2Q5VWX1 349 aaKnown RBP10.31□□□□□ -0.76
TARDBP-221ENST00000619555 OR4C11Q6IEV9 310 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 ZNF585AQ6P3V2 769 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 OPN5Q6U736 354 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 GK5Q6ZS86 529 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 FAM47EQ6ZV65 393 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 SH2D5Q6ZV89 423 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 ACAD11Q709F0 780 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 FAM109AQ8N4B1 249 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 MREGQ8N565 214 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 GOLM1Q8NBJ4 401 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 UBE2E3Q969T4 207 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 MTBPQ96DY7 904 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 CMTM7Q96FZ5 175 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 SENP5Q96HI0 755 aaPredicted RBP10.31□□□□□ -0.76
TARDBP-221ENST00000619555 SACM1LQ9NTJ5 587 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 TMEM216Q9P0N5 145 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 XPR1Q9UBH6 696 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 OPTCQ9UBM4 332 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 SPACA6W5XKT8 324 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 ABCA4P78363 2273 aa10.31□□□□□ -0.76
TARDBP-221ENST00000619555 IQANK1A0A1B0GTG1 560 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 A0A1B0GVC2 190 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 SIX3O95343 332 aaPredicted RBP10.3□□□□□ -0.76
TARDBP-221ENST00000619555 NADKO95544 446 aaPredicted RBP10.3□□□□□ -0.76
TARDBP-221ENST00000619555 IGKV3-11P04433 115 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 P04436 131 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 GLI4P10075 376 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 COL6A2P12110 1019 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 COX7A2P14406 83 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 MSX1P28360 303 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 HNRNPH2P55795 449 aaKnown RBP10.3□□□□□ -0.76
TARDBP-221ENST00000619555 FOLH1Q04609 750 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 PCDH1Q08174 1060 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 SLC10A1Q14973 349 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 SETDB1Q15047 1291 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 RASA2Q15283 850 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 MPEG1Q2M385 716 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 HYAL4Q2M3T9 481 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 ZNF791Q3KP31 576 aaPredicted RBP10.3□□□□□ -0.76
TARDBP-221ENST00000619555 LGSNQ5TDP6 509 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 C18orf63Q68DL7 685 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 RTL6Q6ICC9 239 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 GRHL2Q6ISB3 625 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 LYPD8Q6UX82 237 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 C9orf40Q8IXQ3 194 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 DMRTC2Q8IXT2 367 aaPredicted RBP10.3□□□□□ -0.76
TARDBP-221ENST00000619555 TEX9Q8N6V9 391 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 OR10Q1Q8NGQ4 319 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 HUS1BQ8NHY5 278 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 UBTD2Q8WUN7 234 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 RGMAQ96B86 450 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 DGAT2Q96PD7 388 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 RPF2Q9H7B2 306 aaKnown RBP10.3□□□□□ -0.76
TARDBP-221ENST00000619555 CPSF2Q9P2I0 782 aaKnown RBP10.3□□□□□ -0.76
TARDBP-221ENST00000619555 COPS7AQ9UBW8 275 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 ATG4BQ9Y4P1 393 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 FAM215AQ9Y5M1 114 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.3□□□□□ -0.76
TARDBP-221ENST00000619555 PRRC2AP48634 2157 aaKnown RBP10.3□□□□□ -0.76
TARDBP-221ENST00000619555 MPDZO75970 2070 aa10.3□□□□□ -0.76
TARDBP-221ENST00000619555 ACANP16112 2415 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 MED12Q93074 2177 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 OR14I1A6ND48 311 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 SYCE1LA8MT33 242 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 PLPP1O14494 284 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 AQP7O14520 342 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 BCKDKO14874 412 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 HOXD4P09016 255 aaPredicted RBP10.29□□□□□ -0.76
TARDBP-221ENST00000619555 EPB42P16452 691 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 SERPINB1P30740 379 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 MAN2A2P49641 1150 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 RAP1GDS1P52306 607 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 RPS13P62277 151 aaKnown RBP10.29□□□□□ -0.76
TARDBP-221ENST00000619555 PFKFB4Q16877 469 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 TSNAXIP1Q2TAA8 658 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 FAM219BQ5XKK7 198 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 SLC22A10Q63ZE4 541 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 KLC3Q6P597 504 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 GPR180Q86V85 440 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 MYLK4Q86YV6 388 aaPredicted RBP10.29□□□□□ -0.76
TARDBP-221ENST00000619555 LIX1LQ8IVB5 337 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 NUBPLQ8TB37 319 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 TANKQ92844 425 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 UCN3Q969E3 161 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 RBM18Q96H35 190 aaKnown RBP10.29□□□□□ -0.76
TARDBP-221ENST00000619555 MTERF1Q99551 399 aaKnown RBP10.29□□□□□ -0.76
TARDBP-221ENST00000619555 TTYH2Q9BSA4 534 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 CNPPD1Q9BV87 410 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 C12orf65Q9H3J6 166 aaKnown RBP10.29□□□□□ -0.76
TARDBP-221ENST00000619555 LDAHQ9H6V9 325 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 PROK2Q9HC23 129 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 SH2D2AQ9NP31 389 aa10.29□□□□□ -0.76
TARDBP-221ENST00000619555 DMRT3Q9NQL9 472 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms