RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 RIN1Q13671 783 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 SGCAQ16586 387 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 C6orf132Q5T0Z8 1188 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 MCFD2Q8NI22 146 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 C6orf106Q9H6K1 298 aaPredicted RBP16.51■□□□□ 0.23
PTPN21-208ENST00000556564 SMURF2Q9HAU4 748 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 CUEDC1Q9NWM3 386 aaPredicted RBP16.51■□□□□ 0.23
PTPN21-208ENST00000556564 ASB6Q9NWX5 421 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 UBE2QL1A1L167 161 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 HYKKA2RU49 373 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 TLX2O43763 284 aaPredicted RBP16.51■□□□□ 0.23
PTPN21-208ENST00000556564 PRKAR1AP10644 381 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 ECHS1P30084 290 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 PTGER1P34995 402 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 CTC1Q2NKJ3 1217 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 WSCD2Q2TBF2 565 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 KLHL26Q53HC5 615 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 POC5Q8NA72 575 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 FAM174AQ8TBP5 190 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 CIB4A0PJX0 185 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 HOXC11O43248 304 aaPredicted RBP16.51■□□□□ 0.23
PTPN21-208ENST00000556564 NUAK1O60285 661 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 PSIP1O75475 530 aaKnown RBP16.51■□□□□ 0.23
PTPN21-208ENST00000556564 HK1P19367 917 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 SLC9A3P48764 834 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 NUDT6P53370 316 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 C7orf57Q8NEG2 295 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 RBP7Q96R05 134 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 OR6C1Q96RD1 312 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 NKIRAS2Q9NYR9 191 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 FANCGO15287 622 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 LAMP1P11279 417 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 HYAL1Q12794 435 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 MRPL58Q14197 206 aaKnown RBP16.51■□□□□ 0.23
PTPN21-208ENST00000556564 IDNKQ5T6J7 187 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 TOR1AIP2Q8NFQ8 470 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 DSN1Q9H410 356 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 LOC110117498-PIK3R3F6TDL0 507 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 G3V2L1 256 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 PON3Q15166 354 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 FGF14Q92915 247 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 PKP2Q99959 881 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 IFT46Q9NQC8 304 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 MKS1Q9NXB0 559 aa16.51■□□□□ 0.23
PTPN21-208ENST00000556564 RPH3AQ9Y2J0 694 aaPredicted RBP16.51■□□□□ 0.23
PTPN21-208ENST00000556564 SRFP11831 508 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 SDC2P34741 201 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 CCR2P41597 374 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 CLDN8P56748 225 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 TXNL4AP83876 142 aaKnown RBP16.5■□□□□ 0.23
PTPN21-208ENST00000556564 OR8J3Q8NGG0 315 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 TM9SF3Q9HD45 589 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 LIPT1Q9Y234 373 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 TMEM5Q9Y2B1 443 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 ETFAP13804 333 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 GSTT1P30711 240 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 FOXA1P55317 472 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 DCAF12Q5T6F0 453 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 CCDC106Q9BWC9 280 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 POLR2J2Q9GZM3 115 aaKnown RBP16.5■□□□□ 0.23
PTPN21-208ENST00000556564 EEDO75530 441 aaKnown RBP16.5■□□□□ 0.23
PTPN21-208ENST00000556564 OR12D2P58182 307 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 DENND5AQ6IQ26 1287 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 PDPRQ8NCN5 879 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 OR5K2Q8NHB8 316 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 MRPL3P09001 348 aaKnown RBP16.5■□□□□ 0.23
PTPN21-208ENST00000556564 RPS26P11Q5JNZ5 115 aaPredicted RBP16.5■□□□□ 0.23
PTPN21-208ENST00000556564 ZNF765Q7L2R6 523 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 NR4A3Q92570 626 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 CNDP2Q96KP4 475 aaKnown RBP16.5■□□□□ 0.23
PTPN21-208ENST00000556564 ZNF304Q9HCX3 659 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 TM7SF3Q9NS93 570 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 LAMP5Q9UJQ1 280 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 ATXN7L1Q9ULK2 861 aaPredicted RBP16.5■□□□□ 0.23
PTPN21-208ENST00000556564 PRRT4C9JH25 899 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 AIREO43918 545 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 CPNE6O95741 557 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 RLN1P04808 185 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 UGT2B7P16662 529 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 MC3RP41968 323 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 OR1D4P47884 311 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 CAPZA1P52907 286 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 SLC3A1Q07837 685 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 ZNF222Q9UK12 451 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 PCDHGB5Q9Y5G0 923 aa16.5■□□□□ 0.23
PTPN21-208ENST00000556564 RNF175Q8N4F7 328 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 OSTF1Q92882 214 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 INPP5KQ9BT40 448 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 B3GNT4Q9C0J1 378 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 BRF2Q9HAW0 419 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 OR6C2Q9NZP2 312 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 SRPK3Q9UPE1 567 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 PLEKHM1Q9Y4G2 1056 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 SHANK3Q9BYB0 1731 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 SCRG1O75711 98 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 FADDQ13158 208 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 SERTAD2Q14140 314 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 NPTX1Q15818 432 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 ZNF480Q8WV37 535 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 VSTM2BA6NLU5 285 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms