RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 SELENOVP59797 346 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF33AQ06730 810 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 EOGTQ5NDL2 527 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 CFAP77Q6ZQR2 320 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 Q8N402 240 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ANKRD53Q8N9V6 530 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 OR56A3Q8NH54 315 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 CNIH3Q8TBE1 160 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 EPHA6Q9UF33 1036 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 POLHQ9Y253 713 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 A0A096LPI6 279 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 CKMT1AP12532 417 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ALDH3B2P48448 385 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 MSS51Q4VC12 460 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 PLEKHS1Q5SXH7 462 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 CEACAM19Q7Z692 300 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 NRROSQ86YC3 692 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 OR4K14Q8NGD5 310 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 STK35Q8TDR2 534 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 TSPEARQ8WU66 669 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 MUS81Q96NY9 551 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 G6PC3Q9BUM1 346 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ADAMTS6Q9UKP5 1117 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 KCNK6Q9Y257 313 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM98Q9Y2Y6 226 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 PTTG1O95997 202 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 CHRNA1P02708 482 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 PFKLP17858 780 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 MRPL49Q13405 166 aaKnown RBP9.54□□□□□ -0.88
COL4A6-208ENST00000538570 POU4F3Q15319 338 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 CDNFQ49AH0 187 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 LIPJQ5W064 366 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 GPR139Q6DWJ6 353 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF529Q6P280 563 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 ARL14Q8N4G2 192 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM234Q8WY98 164 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 RAB8BQ92930 207 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 PIP5K1AQ99755 562 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 CPNE5Q9HCH3 593 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 PTNP21246 168 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF84P51523 738 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 PRKCZQ05513 592 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 SERINC3Q13530 473 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 GAS6Q14393 721 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 CMPK2Q5EBM0 449 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 NANOGP8Q6NSW7 305 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 SLC39A4Q6P5W5 647 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 FAM198BQ6UWH4 519 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 SUSD1Q6UWL2 747 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 UGT2A3Q6UWM9 527 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 FAM83HQ6ZRV2 1179 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-208ENST00000538570 LRP10Q7Z4F1 713 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 LMX1AQ8TE12 382 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 OR5P2Q8WZ92 322 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 SH3YL1Q96HL8 342 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-208ENST00000538570 ADAMTS10Q9H324 1103 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 NANOGQ9H9S0 305 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 CREBZFQ9NS37 354 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM248Q9NWD8 314 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 RICTORQ6R327 1708 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 LCMT2O60294 686 aaKnown RBP9.54□□□□□ -0.88
COL4A6-208ENST00000538570 RGS9O75916 674 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-208ENST00000538570 SYNGR4O95473 234 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 HEXBP07686 556 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 SLC2A5P22732 501 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 ADH6P28332 368 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 HSD11B2P80365 405 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM225Q6GV28 225 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 C22orf39Q6P5X5 142 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 OR4K1Q8NGD4 311 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 URM1Q9BTM9 101 aaKnown RBP9.54□□□□□ -0.88
COL4A6-208ENST00000538570 MTG2Q9H4K7 406 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 FZD3Q9NPG1 666 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 NIT2Q9NQR4 276 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 TMPRSS11EQ9UL52 423 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 KCTD3Q9Y597 815 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 PCDHGA2Q9Y5H1 932 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 HSBP1L1C9JCN9 74 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 C11orf98E9PRG8 122 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 PCDH17O14917 1159 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 LDB2O43679 373 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 WDPCPO95876 746 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 AMY2BP19961 511 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 MC2RQ01718 297 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 PIGFQ07326 219 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 NDUFAF5Q5TEU4 345 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 CLDN19Q8N6F1 224 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF382Q96SR6 550 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 DOHHQ9BU89 302 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 POTEKPQ9BYX7 375 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 FN3KQ9H479 309 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 PRODH2Q9UF12 536 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF254O75437 659 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 JUPP14923 745 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 MAGEA3P43357 314 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 KCNQ1P51787 676 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 PPP5CP53041 499 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 PRRT3Q5FWE3 981 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 ZDHHC14Q8IZN3 488 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms