RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 GRID2O43424 1007 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 PIP5K1CO60331 668 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 ZNF254O75437 659 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 NCR1O76036 304 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 ACRV1P26436 265 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 MAGEA3P43357 314 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 BLOC1S1P78537 153 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 FAM198BQ6UWH4 519 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 NOXA1Q86UR1 476 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 IGSF8Q969P0 613 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 RANBP9Q96S59 729 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 IGSF5Q9NSI5 407 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 PCDHB11Q9Y5F2 797 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 WNT6Q9Y6F9 365 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 IRS2Q9Y4H2 1338 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 POM121CA8CG34 1229 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 RTCAO00442 366 aaKnown RBP11.53□□□□□ -0.56
UBR4-205ENST00000417040 CREBL2O60519 120 aaPredicted RBP11.53□□□□□ -0.56
UBR4-205ENST00000417040 CAPN3P20807 821 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 PDX1P52945 283 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 DBF4BQ8NFT6 615 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 OR10T2Q8NGX3 314 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 SMARCD2Q92925 531 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 PSKH2Q96QS6 385 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 TMEM181Q9P2C4 612 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 E7ESA3 106 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 ARSDP51689 593 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 RPL19P84098 196 aaKnown RBP11.53□□□□□ -0.56
UBR4-205ENST00000417040 TMEM115Q12893 351 aaPredicted RBP11.53□□□□□ -0.56
UBR4-205ENST00000417040 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 ALG10Q5BKT4 473 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 TTLL10Q6ZVT0 673 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 CD99L2Q8TCZ2 262 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 SCAMP4Q969E2 229 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 MUSKO15146 869 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 LYRM1O43325 122 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 ARSAP15289 507 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 CD34P28906 385 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 HSD17B2P37059 387 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 UBQLNLQ8IYU4 475 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 ARL14Q8N4G2 192 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 OR52E2Q8NGJ4 325 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 PTERQ96BW5 349 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 TSGA13Q96PP4 275 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 SLC30A3Q99726 388 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 Q9N2J8 555 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 C5AR2Q9P296 337 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 ENPP5Q9UJA9 477 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 B3GALT1Q9Y5Z6 326 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 SLIT2O94813 1529 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 LOC102723532A0A0G2JNH3 316 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 TSPAN6O43657 245 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 COQ9O75208 318 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 STK19P49842 368 aaPredicted RBP11.52□□□□□ -0.56
UBR4-205ENST00000417040 GK2Q14410 553 aaPredicted RBP11.52□□□□□ -0.56
UBR4-205ENST00000417040 CNIH2Q6PI25 160 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 TPRG1Q6ZUI0 275 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 METTL25Q8N6Q8 603 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 OR56A3Q8NH54 315 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 CACNG6Q9BXT2 260 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 ANKRD60Q9BZ19 345 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 SERINC1Q9NRX5 453 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 YIPF1Q9Y548 306 aa11.52□□□□□ -0.56
UBR4-205ENST00000417040 HSPA12AO43301 675 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 HPGDSO60760 199 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 TRAPPC6AO75865 159 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 PLGP00747 810 aaPredicted RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 TFP02787 698 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 RPS17P08708 135 aaKnown RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 GCGRP47871 477 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 HTR6P50406 440 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 CDK10Q15131 360 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 NKPD1Q17RQ9 610 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 LCN8Q6JVE9 175 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 LRFN4Q6PJG9 635 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 SERPINA12Q8IW75 414 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 ZNF283Q8N7M2 679 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 SCGB1C1Q8TD33 95 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 SUSD3Q96L08 255 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 COQ10AQ96MF6 247 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 F2RL3Q96RI0 385 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 SCAMP2O15127 329 aaKnown RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 EOMESO95936 686 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 PAHP00439 452 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 LIPCP11150 499 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 ADH5P11766 374 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 GP1BBP13224 206 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 POLR2CP19387 275 aaPredicted RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 SLAMF1Q13291 335 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 DECR1Q16698 335 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 OR4N5Q8IXE1 308 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 VWA5B2Q8N398 1253 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 APIPQ96GX9 242 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 HYLS1Q96M11 299 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 CNOT11Q9UKZ1 510 aaKnown RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 PTTG1O95997 202 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 ERVPABLB-1P60509 514 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 PRRT3Q5FWE3 981 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 MLIPQ5VWP3 458 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 GLT8D1Q68CQ7 371 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms