RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 MAGED4Q96JG8 741 aa16.38■□□□□ 0.21
LSM5-204ENST00000409909 PELOQ9BRX2 385 aaKnown RBP16.38■□□□□ 0.21
LSM5-204ENST00000409909 CNPPD1Q9BV87 410 aa16.38■□□□□ 0.21
LSM5-204ENST00000409909 DCDC2Q9UHG0 476 aa16.38■□□□□ 0.21
LSM5-204ENST00000409909 LRBAP50851 2863 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 G3V2L1 256 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 G3V3Y1 287 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 TFECO14948 347 aaPredicted RBP16.37■□□□□ 0.21
LSM5-204ENST00000409909 HS6ST1O60243 411 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 CHN1P15882 459 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 GALNSP34059 522 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 DCTP40126 519 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 MAPK12P53778 367 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 SLC37A1P57057 533 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 RASA2Q15283 850 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 CMPK2Q5EBM0 449 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 OPN5Q6U736 354 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 LYPD8Q6UX82 237 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 RTL4Q6ZR62 310 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 GPRIN3Q6ZVF9 776 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 SLC22A9Q8IVM8 553 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 MMP21Q8N119 569 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 OR2M7Q8NG81 312 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 OR52N2Q8NGI0 321 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 ITLN2Q8WWU7 325 aaPredicted RBP16.37■□□□□ 0.21
LSM5-204ENST00000409909 ART5Q96L15 291 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 ANKZF1Q9H8Y5 726 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 CXorf21Q9HAI6 301 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 CES1P1Q9UKY3 287 aa16.37■□□□□ 0.21
LSM5-204ENST00000409909 CACNA1DQ01668 2161 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 ZNF407Q9C0G0 2248 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 PIK3R1P27986 724 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 XKP51811 444 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 CASP6P55212 293 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 LCP2Q13094 533 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 ZNF791Q3KP31 576 aaPredicted RBP16.36■□□□□ 0.21
LSM5-204ENST00000409909 BNC2Q6ZN30 1099 aaPredicted RBP16.36■□□□□ 0.21
LSM5-204ENST00000409909 RNF111Q6ZNA4 994 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 TDRPQ86YL5 185 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 C1orf52Q8N6N3 182 aaKnown RBP16.36■□□□□ 0.21
LSM5-204ENST00000409909 GOLM1Q8NBJ4 401 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 OR4K14Q8NGD5 310 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 METTL6Q8TCB7 284 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 EPS8L3Q8TE67 593 aaKnown RBP16.36■□□□□ 0.21
LSM5-204ENST00000409909 CHTF18Q8WVB6 975 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 TM4SF18Q96CE8 201 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 SGCZQ96LD1 299 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 GSTO2Q9H4Y5 243 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 VPS29Q9UBQ0 182 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 SUCOQ9UBS9 1254 aaKnown RBP16.36■□□□□ 0.21
LSM5-204ENST00000409909 PCDHA9Q9Y5H5 950 aa16.36■□□□□ 0.21
LSM5-204ENST00000409909 SMIM23A6NLE4 172 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 UBFD1O14562 309 aaKnown RBP16.35■□□□□ 0.21
LSM5-204ENST00000409909 KRT6AP02538 564 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 PROCP04070 461 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 KRT6BP04259 564 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 CT62P0C5K7 136 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 CCL3P10147 92 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 CNR1P21554 472 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 SSTR4P31391 388 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 KRT6CP48668 564 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 HTR6P50406 440 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 ADORA2A-AS1P86434 159 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 EBPQ15125 230 aaKnown RBP16.35■□□□□ 0.21
LSM5-204ENST00000409909 SLC48A1Q6P1K1 146 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 ZYG11AQ6WRX3 759 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 DOLPP1Q86YN1 238 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 CNPY4Q8N129 248 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 PHF12Q96QT6 1004 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 KCNA7Q96RP8 456 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 WWTR1Q9GZV5 400 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 C12orf65Q9H3J6 166 aaKnown RBP16.35■□□□□ 0.21
LSM5-204ENST00000409909 SH2D2AQ9NP31 389 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 PLSCR2Q9NRY7 297 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.35■□□□□ 0.21
LSM5-204ENST00000409909 NMRK1Q9NWW6 199 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 ADGRG4Q8IZF6 3080 aa16.35■□□□□ 0.21
LSM5-204ENST00000409909 NCOA6Q14686 2063 aaPredicted RBP16.34■□□□□ 0.21
LSM5-204ENST00000409909 A0A1B0GTH9 108 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 OR6C76A6NM76 312 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 ADAM10O14672 748 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 CDC40O60508 579 aaKnown RBP eCLIP16.34■□□□□ 0.21
LSM5-204ENST00000409909 GLRA3O75311 464 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 ULK1O75385 1050 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 PDE9AO76083 593 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 GLSO94925 669 aaPredicted RBP16.34■□□□□ 0.21
LSM5-204ENST00000409909 HSD3B1P14060 373 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 CPMP14384 443 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 ABOP16442 354 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 HSD3B2P26439 372 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 PKNOX1P55347 436 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 PPIAP62937 165 aaKnown RBP16.34■□□□□ 0.21
LSM5-204ENST00000409909 RAE1P78406 368 aaKnown RBP16.34■□□□□ 0.21
LSM5-204ENST00000409909 FUT7Q11130 342 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 CSTF3Q12996 717 aaKnown RBP16.34■□□□□ 0.21
LSM5-204ENST00000409909 MTFR2Q6P444 385 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 NCCRP1Q6ZVX7 275 aaPredicted RBP16.34■□□□□ 0.21
LSM5-204ENST00000409909 SLC29A4Q7RTT9 530 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 MRGPRGQ86SM5 289 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 SLC15A4Q8N697 577 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms