RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 KIR2DL3P43628 341 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 SGSHP51688 502 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 SCAPQ12770 1279 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 SEMA3BQ13214 749 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 GBX1Q14549 363 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 HECTD3Q5T447 861 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 CDC73Q6P1J9 531 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 C7orf61Q8IZ16 206 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 CSGALNACT1Q8TDX6 532 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 SORCS1Q8WY21 1168 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 C3orf49Q96BT1 292 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 DUSP21Q9H596 190 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 FBXO8Q9NRD0 319 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 PSORS1C1Q9UIG5 152 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 TLR6Q9Y2C9 796 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 DERAQ9Y315 318 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 OR10H1Q9Y4A9 318 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 SCN2AQ99250 2005 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 XIRP2A4UGR9 3374 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 ZC3H12DA2A288 527 aaKnown RBP8.4□□□□□ -1.06
RTN4-206ENST00000394611 SH3D21A4FU49 640 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 PRAMEF11O60813 436 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 SOX2P48431 317 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 CEBPGP53567 150 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 CLDN12P56749 244 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 ID2Q02363 134 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 C9orf64Q5T6V5 341 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 LRRTM4Q86VH4 590 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 FOXRED2Q8IWF2 684 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 SPERTQ8NA61 448 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 RASSF5Q8WWW0 418 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 CLP1Q92989 425 aaKnown RBP8.4□□□□□ -1.06
RTN4-206ENST00000394611 OTUB2Q96DC9 234 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 TRMT61AQ96FX7 289 aaKnown RBP8.4□□□□□ -1.06
RTN4-206ENST00000394611 SLC38A2Q96QD8 506 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 NFKBIZQ9BYH8 718 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 EGLN3Q9H6Z9 239 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 GORASP2Q9H8Y8 452 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 MED20Q9H944 212 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 DNMT3BQ9UBC3 853 aaKnown RBP8.4□□□□□ -1.06
RTN4-206ENST00000394611 RPL36Q9Y3U8 105 aaKnown RBP8.4□□□□□ -1.06
RTN4-206ENST00000394611 SNX11Q9Y5W9 270 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 CDH23Q9H251 3354 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 ZNF487B1APH4 448 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 B4DXG7 233 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 ALDH2P05091 517 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 H1F0P07305 194 aaKnown RBP8.4□□□□□ -1.07
RTN4-206ENST00000394611 ARSBP15848 533 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 SELPP16109 830 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 SYN1P17600 705 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 DNAJB1P25685 340 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 ITGA3P26006 1051 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 HBA1P69905 142 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 GALNT1Q10472 559 aaPredicted RBP8.4□□□□□ -1.07
RTN4-206ENST00000394611 SNTA1Q13424 505 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 NFATC2Q13469 925 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 GAB1Q13480 694 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 GALEQ14376 348 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 GPNMBQ14956 572 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 LARS2Q15031 903 aaKnown RBP8.4□□□□□ -1.07
RTN4-206ENST00000394611 CCSMST1Q4G0I0 132 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 LAIR2Q6ISS4 152 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 Q6ZVU0 165 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 PRSS45Q7RTY3 260 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 GALNT7Q86SF2 657 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 HAVCR2Q8TDQ0 301 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 CHAC2Q8WUX2 184 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 ST6GAL2Q96JF0 529 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 COQ10AQ96MF6 247 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 MCCC1Q96RQ3 725 aaPredicted RBP8.4□□□□□ -1.07
RTN4-206ENST00000394611 CPPED1Q9BRF8 314 aaPredicted RBP8.4□□□□□ -1.07
RTN4-206ENST00000394611 MND1Q9BWT6 205 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 CACNG6Q9BXT2 260 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 ARL6Q9H0F7 186 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 OSGIN1Q9UJX0 560 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 TBX21Q9UL17 535 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 TET1Q8NFU7 2136 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 A0A0G2JMP0 313 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 TEX13CA0A0J9YWL9 993 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 A0A0X1KG70 313 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 GABRR3A8MPY1 467 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 WNT9AO14904 365 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 ZNF780AO75290 641 aaPredicted RBP8.4□□□□□ -1.07
RTN4-206ENST00000394611 M6PRP20645 277 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 SPAM1P38567 509 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 ADH7P40394 386 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 ZNF91Q05481 1191 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 GRM7Q14831 915 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 SLC5A12Q1EHB4 618 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 KHDRBS2Q5VWX1 349 aaKnown RBP8.4□□□□□ -1.07
RTN4-206ENST00000394611 BICRALQ6AI39 1079 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 PLAG1Q6DJT9 500 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 ARSKQ6UWY0 536 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 CCDC71Q8IV32 467 aaPredicted RBP8.4□□□□□ -1.07
RTN4-206ENST00000394611 VRK3Q8IV63 474 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 ZNF655Q8N720 491 aaPredicted RBP8.4□□□□□ -1.07
RTN4-206ENST00000394611 ZNF740Q8NDX6 193 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 OR4M2Q8NGB6 313 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 RIPOR3Q96MK2 946 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 OR2A14Q96R47 310 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms