RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 AQP12BA6NM10 295 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 RNH1P13489 461 aaKnown RBP19.58■□□□□ 0.72
PNKP-203ENST00000593946 CD59P13987 128 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 NCK1P16333 377 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 MPIP34949 423 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 FEN1P39748 380 aaKnown RBP19.58■□□□□ 0.72
PNKP-203ENST00000593946 AVPR1BP47901 424 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 RHDQ02161 417 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 CPZQ66K79 652 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 SLITRK4Q8IW52 837 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 AQP12AQ8IXF9 295 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 CCDC116Q8IYX3 515 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 RCBTB1Q8NDN9 531 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 NEURL3Q96EH8 262 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 DPH2Q9BQC3 489 aaPredicted RBP19.58■□□□□ 0.72
PNKP-203ENST00000593946 SPATA9Q9BWV2 254 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 FTSJ1Q9UET6 329 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 SERTAD3Q9UJW9 196 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 CLCA2Q9UQC9 943 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 HCN4Q9Y3Q4 1203 aa19.58■□□□□ 0.72
PNKP-203ENST00000593946 FAM227AF5H4B4 570 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 H0YIG0 161 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 KCNK5O95279 499 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 CHI3L1P36222 383 aaPredicted RBP19.57■□□□□ 0.72
PNKP-203ENST00000593946 AP2B1P63010 937 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 VAC14Q08AM6 782 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 FADDQ13158 208 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 ADRM1Q16186 407 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 CYP51A1Q16850 503 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.57■□□□□ 0.72
PNKP-203ENST00000593946 SAXO2Q658L1 398 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 GLYATQ6IB77 296 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 SPPL2CQ8IUH8 684 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 PRSS33Q8NF86 280 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 TANKQ92844 425 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 MVB12AQ96EY5 273 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 MMABQ96EY8 250 aaPredicted RBP19.57■□□□□ 0.72
PNKP-203ENST00000593946 RXFP3Q9NSD7 469 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 HCN3Q9P1Z3 774 aa19.57■□□□□ 0.72
PNKP-203ENST00000593946 STX18Q9P2W9 335 aaKnown RBP19.57■□□□□ 0.72
PNKP-203ENST00000593946 TMEM184BQ9Y519 407 aaPredicted RBP19.57■□□□□ 0.72
PNKP-203ENST00000593946 H3BNX3 289 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 ZNF749O43361 778 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 KRT75O95678 551 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 GPC1P35052 558 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 XKP51811 444 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 ACY1Q03154 408 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 COX20Q5RI15 118 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 YOD1Q5VVQ6 348 aaPredicted RBP19.56■□□□□ 0.72
PNKP-203ENST00000593946 ZFP1Q6P2D0 407 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 TMEM64Q6YI46 380 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 PTOV1Q86YD1 416 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 ZZZ3Q8IYH5 903 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 LRRC25Q8N386 305 aaPredicted RBP19.56■□□□□ 0.72
PNKP-203ENST00000593946 ADAMTS18Q8TE60 1221 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 RSRC1Q96IZ7 334 aaKnown RBP19.56■□□□□ 0.72
PNKP-203ENST00000593946 EDEM2Q9BV94 578 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 TMEM121BQ9BXQ6 578 aaPredicted RBP19.56■□□□□ 0.72
PNKP-203ENST00000593946 RAD21L1Q9H4I0 556 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 CCT3P49368 545 aaKnown RBP19.56■□□□□ 0.72
PNKP-203ENST00000593946 FOLH1Q04609 750 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 SPEM2Q0P670 501 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 ERICH5Q6P6B1 374 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 ANGPTL8Q6UXH0 198 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 TTLL10Q6ZVT0 673 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 RNF130Q86XS8 419 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 GOLM1Q8NBJ4 401 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 DUS3LQ96G46 650 aaKnown RBP19.56■□□□□ 0.72
PNKP-203ENST00000593946 PRRX2Q99811 253 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 GORASP2Q9H8Y8 452 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 SEMA3GQ9NS98 782 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 SIDT1Q9NXL6 827 aaKnown RBP19.56■□□□□ 0.72
PNKP-203ENST00000593946 NUP210LQ5VU65 1888 aa19.56■□□□□ 0.72
PNKP-203ENST00000593946 GSTA4O15217 222 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 FGF17O60258 216 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 B4GALT2O60909 372 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 LDB3O75112 727 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 CPMP14384 443 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 ARSFP54793 590 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 POLE2P56282 527 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 MAT1AQ00266 395 aaKnown RBP19.55■□□□□ 0.72
PNKP-203ENST00000593946 VMACQ2NL98 169 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 PRAMEF17Q5VTA0 474 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 OR4N5Q8IXE1 308 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 METTL27Q8N6F8 245 aaPredicted RBP19.55■□□□□ 0.72
PNKP-203ENST00000593946 SFXN5Q8TD22 340 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 ATOH1Q92858 354 aaPredicted RBP19.55■□□□□ 0.72
PNKP-203ENST00000593946 PEX11GQ96HA9 241 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 NSMCE2Q96MF7 247 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 LRFN3Q9BTN0 628 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 NDC1Q9BTX1 674 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 TMEM9BQ9NQ34 198 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 SEMA4GQ9NTN9 838 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 CUL9Q8IWT3 2517 aa19.55■□□□□ 0.72
PNKP-203ENST00000593946 TCRBV5S2A0A599 114 aa19.54■□□□□ 0.72
PNKP-203ENST00000593946 BLACEA4D250 179 aa19.54■□□□□ 0.72
PNKP-203ENST00000593946 CXCR6O00574 342 aa19.54■□□□□ 0.72
PNKP-203ENST00000593946 TNFRSF21O75509 655 aa19.54■□□□□ 0.72
PNKP-203ENST00000593946 GPR75O95800 540 aa19.54■□□□□ 0.72
PNKP-203ENST00000593946 ETFAP13804 333 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms