RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 XIRP2A4UGR9 3374 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 CACNB4O00305 520 aaPredicted RBP16.75■□□□□ 0.27
RAB40C-205ENST00000539661 ELAVL4P26378 380 aaKnown RBP16.75■□□□□ 0.27
RAB40C-205ENST00000539661 LIM2P55344 173 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 BTG1P62324 171 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 ATAT1Q5SQI0 421 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 IFNL1Q8IU54 200 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 TMEM145Q8NBT3 493 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 GKN1Q9NS71 199 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 SLC23A1Q9UHI7 598 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 MAP4K5Q9Y4K4 846 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 CLCA3PQ9Y6N3 262 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 TMEM129A0AVI4 362 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 TBL1XO60907 577 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 RFPL3O75679 317 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 NAT1P18440 290 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 PUM1Q14671 1186 aaKnown RBP eCLIP16.74■□□□□ 0.27
RAB40C-205ENST00000539661 DUSP6Q16828 381 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 SLC5A12Q1EHB4 618 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 TOR2AQ5JU69 321 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 BICRALQ6AI39 1079 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 REEP3Q6NUK4 255 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 CRTC1Q6UUV9 634 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 UNC5DQ6UXZ4 953 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 TSPAN33Q86UF1 283 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 SLC51BQ86UW2 128 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 GHDCQ8N2G8 530 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 OR52P1PQ8NH57 321 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 C1GALT1C1Q96EU7 318 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 ALG14Q96F25 216 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 POLR2J3Q9H1A7 115 aaKnown RBP16.74■□□□□ 0.27
RAB40C-205ENST00000539661 NT5DC2Q9H857 520 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 FRMPD3Q5JV73 1810 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 FAM227AF5H4B4 570 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 K7ERQ8 282 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 PDPK1O15530 556 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 SOX14O95416 240 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 GABRA5P31644 462 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 ETV5P41161 510 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 EVX1P49640 407 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 ETV1P50549 477 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 MAPK12P53778 367 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 ZDHHC20Q5W0Z9 365 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 RETSATQ6NUM9 610 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 CD200R1LQ6Q8B3 271 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 TPRG1Q6ZUI0 275 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 OR7G3Q8NG95 312 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 TMEM203Q969S6 136 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 GPR137Q96N19 417 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 PKP4Q99569 1192 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 NARFLQ9H6Q4 476 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 FOLH1BQ9HBA9 442 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 MRPS18AQ9NVS2 196 aaKnown RBP16.74■□□□□ 0.27
RAB40C-205ENST00000539661 ZSCAN32Q9NX65 697 aa16.74■□□□□ 0.27
RAB40C-205ENST00000539661 NPIPB15A6NHN6 443 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-205ENST00000539661 OR10H3O60404 316 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 FURINP09958 794 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 CFL1P23528 166 aaKnown RBP16.73■□□□□ 0.27
RAB40C-205ENST00000539661 CSKP41240 450 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 DGKEP52429 567 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 SMIM11AP58511 58 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 DSTNP60981 165 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 RPS25P62851 125 aaKnown RBP16.73■□□□□ 0.27
RAB40C-205ENST00000539661 FLYWCH1Q4VC44 716 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 CRTC2Q53ET0 693 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-205ENST00000539661 GLCCI1Q86VQ1 547 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 GPR156Q8NFN8 814 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 UFD1Q92890 307 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 PPCDCQ96CD2 204 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 GLTPQ9NZD2 209 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 COMMD3Q9UBI1 195 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 ADAM30Q9UKF2 790 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 ACSL6Q9UKU0 697 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 ELF5Q9UKW6 265 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-205ENST00000539661 CDH10Q9Y6N8 788 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 PDE4DIPQ5VU43 2346 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 TRAV19A0A0A6YYK7 116 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 INMT-MINDY4F8WBC2 141 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 ATP1B2P14415 290 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-205ENST00000539661 INPP1P49441 399 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 RIPPLY1Q0D2K3 151 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 SEC23BQ15437 767 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 KIAA1211LQ6NV74 962 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 PGBD2Q6P3X8 592 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 RSPO2Q6UXX9 243 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-205ENST00000539661 SLC37A3Q8NCC5 494 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 MTERF3Q96E29 417 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 ASIC4Q96FT7 647 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 PIGUQ9H490 435 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 FGF20Q9NP95 211 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-205ENST00000539661 MAT2BQ9NZL9 334 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 KIAA1671Q9BY89 1806 aa16.73■□□□□ 0.27
RAB40C-205ENST00000539661 H1F0P07305 194 aaKnown RBP16.72■□□□□ 0.27
RAB40C-205ENST00000539661 IGFBP1P08833 259 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-205ENST00000539661 HK1P19367 917 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 SERPINA4P29622 427 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 CCND3P30281 292 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-205ENST00000539661 DGKGP49619 791 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 IL18Q14116 193 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 FAM26DQ5JW98 314 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms