RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 TUBA3CQ13748 450 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 BMPR2Q13873 1038 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 SEMA3AQ14563 771 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 HERC3Q15034 1050 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 TRIP13Q15645 432 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZIC1Q15915 447 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 HIST2H2ACQ16777 129 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 KLHL38Q2WGJ6 581 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 LSM12Q3MHD2 195 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZNF789Q5FWF6 425 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 C6orf163Q5TEZ5 329 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 HECTD2Q5U5R9 776 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 KCTD11Q693B1 232 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 HIST2H2AA3Q6FI13 130 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 PPP4R4Q6NUP7 873 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 RPUSD3Q6P087 351 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 TUBA3EQ6PEY2 450 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 KIRREL2Q6UWL6 708 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 OVCH2Q7RTZ1 564 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 CPEB2Q7Z5Q1 589 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ASPGQ86U10 573 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 LDB1Q86U70 411 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 PAQR7Q86WK9 346 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 FAM90A1Q86YD7 464 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 LURAP1LQ8IV03 231 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 MCEMP1Q8IX19 187 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 GHDCQ8N2G8 530 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 MYRIPQ8NFW9 859 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR13J1Q8NGT2 312 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR51Q1Q8NH59 317 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 HMGCLL1Q8TB92 370 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZCCHC10Q8TBK6 192 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC13A3Q8WWT9 602 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 NR4A3Q92570 626 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 HAS2Q92819 552 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 MAGOHBQ96A72 148 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 C8orf44Q96CB5 159 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 MTFMTQ96DP5 389 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 MARS2Q96GW9 593 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 PRAP1Q96NZ9 151 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 DESI2Q9BSY9 194 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 NAT9Q9BTE0 207 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZNF747Q9BV97 191 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 DEFB126Q9BYW3 111 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 MRPL46Q9H2W6 279 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 RHBGQ9H310 441 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 AKIP1Q9NQ31 210 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 KLHL1Q9NR64 748 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 TMEM184CQ9NVA4 438 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 JKAMPQ9P055 326 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 HCN3Q9P1Z3 774 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC2A6Q9UGQ3 507 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ASIC3Q9UHC3 531 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 TFR2Q9UP52 801 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 MYRFQ9Y2G1 1151 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 KLF2Q9Y5W3 355 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 HS3ST3B1Q9Y662 390 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 PRSS21Q9Y6M0 314 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 PTPN13Q12923 2485 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 SPTAN1Q13813 2472 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 LOC400499M0QZD8 3231 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 DOPEY2Q9Y3R5 2298 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZNF106Q9H2Y7 1883 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 MYO9AB2RTY4 2548 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 IGHV1-45A0A0A0MS14 117 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 A0A0U1RQJ8 604 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ANKDD1BA6NHY2 528 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 GOLGA8KD6RF30 607 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NPIPA5E9PKD4 350 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NPIPB8E9PQR5 432 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 GOLGA8MH3BSY2 632 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 EIF3FO00303 357 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 RNASET2O00584 256 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC16A5O15375 505 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZSCAN12O43309 604 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 B4GALT2O60909 372 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NIPSNAP2O75323 286 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ERN1O75460 977 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 GPC4O75487 556 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CDC123O75794 336 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZWINTO95229 277 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 MATN4O95460 622 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NSA2O95478 260 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CLDN14O95500 239 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 GPANK1O95872 356 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 WDPCPO95876 746 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 IFNA16P05015 189 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 TPOP07202 933 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CAPN1P07384 714 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 STSP08842 583 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 MPC1LP0DKB6 136 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 MLNP12872 115 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 TPSB2P20231 275 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CAPN3P20807 821 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 PSMB5P28074 263 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NMBRP28336 390 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 RPL22P35268 128 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ARL1P40616 181 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 PAFAH1B1P43034 410 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms