RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 PCDHB3Q9Y5E6 796 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 RNF103-CHMP3A0A140T963 221 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 ARPC2O15144 300 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 FGF17O60258 216 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 B4GALT2O60909 372 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 LDB3O75112 727 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 KRT36O76013 467 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 LMNAP02545 664 aaKnown RBP17.51■□□□□ 0.39
CLN3-206ENST00000360019 UQCRC2P22695 453 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 XKP51811 444 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 ID2Q02363 134 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 CYP2R1Q6VVX0 501 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 ZFP28Q8NHY6 868 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 JADE3Q92613 823 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 MVB12AQ96EY5 273 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 PEX11GQ96HA9 241 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 NDC1Q9BTX1 674 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 ACTR3BQ9P1U1 418 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 SNX13Q9Y5W8 968 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 MAU2Q9Y6X3 613 aa17.51■□□□□ 0.39
CLN3-206ENST00000360019 COL27A1Q8IZC6 1860 aaPredicted RBP17.5■□□□□ 0.39
CLN3-206ENST00000360019 FAM220BPB1ANY3 271 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 RNH1P13489 461 aaKnown RBP17.5■□□□□ 0.39
CLN3-206ENST00000360019 NCK1P16333 377 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 ALAS2P22557 587 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 PPIBP23284 216 aaKnown RBP17.5■□□□□ 0.39
CLN3-206ENST00000360019 MPIP34949 423 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 NBL1P41271 181 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 C16orf72Q14CZ0 275 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 RGNQ15493 299 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 COX20Q5RI15 118 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.5■□□□□ 0.39
CLN3-206ENST00000360019 LCN8Q6JVE9 175 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 SERPINA11Q86U17 422 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 DHFR2Q86XF0 187 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 OR9A2Q8NGT5 310 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 TANKQ92844 425 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 CHST8Q9H2A9 424 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 CLK4Q9HAZ1 481 aaKnown RBP17.5■□□□□ 0.39
CLN3-206ENST00000360019 OCIAD1Q9NX40 245 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 NDOR1Q9UHB4 597 aa17.5■□□□□ 0.39
CLN3-206ENST00000360019 LRP3O75074 770 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 GPC1P35052 558 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 CHI3L1P36222 383 aaPredicted RBP17.49■□□□□ 0.39
CLN3-206ENST00000360019 OR1D4P47884 311 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 CASP9P55211 416 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 TRA2AQ13595 282 aaKnown RBP eCLIP17.49■□□□□ 0.39
CLN3-206ENST00000360019 LTB4RQ15722 352 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 AASDHQ4L235 1098 aaPredicted RBP17.49■□□□□ 0.39
CLN3-206ENST00000360019 ANGPTL8Q6UXH0 198 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 LRRC25Q8N386 305 aaPredicted RBP17.49■□□□□ 0.39
CLN3-206ENST00000360019 OR52N2Q8NGI0 321 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 SLC26A7Q8TE54 656 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.49■□□□□ 0.39
CLN3-206ENST00000360019 STMN2Q93045 179 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 ANKRD9Q96BM1 317 aaPredicted RBP17.49■□□□□ 0.39
CLN3-206ENST00000360019 RNF31Q96EP0 1072 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 REXO5Q96IC2 774 aaKnown RBP17.49■□□□□ 0.39
CLN3-206ENST00000360019 DPH2Q9BQC3 489 aaPredicted RBP17.49■□□□□ 0.39
CLN3-206ENST00000360019 CORO2BQ9UQ03 480 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 ELOVL7A1L3X0 281 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 DSCR3O14972 297 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 GDF9O60383 454 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 KCNK5O95279 499 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 TIAF1O95411 115 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 PSMG1O95456 288 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 GPR75O95800 540 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 NUDT7P0C024 238 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 ARSFP54793 590 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 ERV3-1Q14264 604 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 ADRM1Q16186 407 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 CYP51A1Q16850 503 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 YOD1Q5VVQ6 348 aaPredicted RBP17.49■□□□□ 0.39
CLN3-206ENST00000360019 SAXO2Q658L1 398 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 SPATA24Q86W54 205 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 RNF130Q86XS8 419 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 PTOV1Q86YD1 416 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 SAMD14Q8IZD0 417 aaPredicted RBP17.49■□□□□ 0.39
CLN3-206ENST00000360019 OR51Q1Q8NH59 317 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 ADAMTS18Q8TE60 1221 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 NEURL3Q96EH8 262 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 MUC13Q9H3R2 512 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 MAP4K5Q9Y4K4 846 aa17.49■□□□□ 0.39
CLN3-206ENST00000360019 DMXL1Q9Y485 3027 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 FER1L5A0AVI2 2057 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 MYOCOSA0A1B0GUC4 107 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 A0A1B0GX78 115 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 H0Y3Z8 333 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 CPMP14384 443 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 GGT1P19440 569 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 CSTF2P33240 577 aaKnown RBP eCLIP17.48■□□□□ 0.39
CLN3-206ENST00000360019 CCT3P49368 545 aaKnown RBP17.48■□□□□ 0.39
CLN3-206ENST00000360019 MRPS22P82650 360 aaKnown RBP17.48■□□□□ 0.39
CLN3-206ENST00000360019 VAC14Q08AM6 782 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 CPZQ66K79 652 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 TMEM107Q6UX40 140 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 SPPL2CQ8IUH8 684 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 ZZZ3Q8IYH5 903 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 MICU2Q8IYU8 434 aa17.48■□□□□ 0.39
CLN3-206ENST00000360019 PYDC1Q8WXC3 89 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms