RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 TEAD2Q15562 447 aa15.27■□□□□ 0.03
CACNA1A-202ENST00000573710 CCDC116Q8IYX3 515 aa15.27■□□□□ 0.03
CACNA1A-202ENST00000573710 RBM15BQ8NDT2 890 aaKnown RBP15.27■□□□□ 0.03
CACNA1A-202ENST00000573710 HNRNPLLQ8WVV9 542 aaKnown RBP15.27■□□□□ 0.03
CACNA1A-202ENST00000573710 ZNRF4Q8WWF5 429 aa15.27■□□□□ 0.03
CACNA1A-202ENST00000573710 MSI2Q96DH6 328 aaKnown RBP15.27■□□□□ 0.03
CACNA1A-202ENST00000573710 ZNF286AQ9HBT8 521 aa15.27■□□□□ 0.03
CACNA1A-202ENST00000573710 PRTFDC1Q9NRG1 225 aa15.27■□□□□ 0.03
CACNA1A-202ENST00000573710 ASB3Q9Y575 518 aa15.27■□□□□ 0.03
CACNA1A-202ENST00000573710 ABCA8O94911 1581 aa15.27■□□□□ 0.03
CACNA1A-202ENST00000573710 F8W036 122 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 AQP7O14520 342 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 BLOC1S1P78537 153 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 NTRK3Q16288 839 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 VSTM1Q6UX27 236 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 IL20RBQ6UXL0 311 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 SH3RF1Q7Z6J0 888 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 FJX1Q86VR8 437 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 SAMD12Q8N8I0 201 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 SCAMP5Q8TAC9 235 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 ACMSDQ8TDX5 336 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 DENND1AQ8TEH3 1009 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 TOMM40LQ969M1 308 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 REEP6Q96HR9 211 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 MKLN1Q9UL63 735 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 REREQ9P2R6 1566 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 NIPSNAP2O75323 286 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 H1F0P07305 194 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 PFKLP17858 780 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 CDC34P49427 236 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 AIF1P55008 147 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 PTPRRQ15256 657 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 SAMD14Q8IZD0 417 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 TMEM151AQ8N4L1 468 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 SLC22A17Q8WUG5 538 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 HPSE2Q8WWQ2 592 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 ECHDC3Q96DC8 303 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 CSPG4P5Q96PW8 444 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 CXorf21Q9HAI6 301 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 CHRNA1P02708 482 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 TNFSF4P23510 183 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 OR4D2P58180 307 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 FTMTQ8N4E7 242 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 FOXRED1Q96CU9 486 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 SMIM12Q96EX1 92 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 GKN1Q9NS71 199 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 SORCS3Q9UPU3 1222 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 CNTN6Q9UQ52 1028 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 ECI2O75521 394 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 RCBTB2O95199 551 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 CKMT1AP12532 417 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 SOX3P41225 446 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 ZNF648Q5T619 568 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 VSIG10LQ86VR7 867 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 TMPRSS12Q86WS5 348 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 DIO2Q92813 273 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 HOXB13Q92826 284 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 TSACCQ96A04 125 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 SYNPO2LQ9H987 977 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 CSNK2A1P68400 391 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 KIAA1614Q5VZ46 1190 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 LGI4Q8N135 537 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 CSNK2A3Q8NEV1 391 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 OR7G2Q8NG99 324 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 BBS10Q8TAM1 723 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 ZC3HAV1LQ96H79 300 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 HHIPQ96QV1 700 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 NAA11Q9BSU3 229 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 EFCAB11Q9BUY7 163 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 LIN7CQ9NUP9 197 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 SPDEFO95238 335 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 HLA-FP30511 346 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 GGT5P36269 586 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 PIGGQ5H8A4 983 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 ZNF836Q6ZNA1 936 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 TECPR1Q7Z6L1 1165 aa15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 PRDM15P57071 1507 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-202ENST00000573710 AP1G1O43747 822 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 MAFO75444 373 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 KLF8O95600 359 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 RPS24P62847 133 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 SLC35A2P78381 396 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 OR51T1Q8NGJ9 327 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 DHRS9Q9BPW9 319 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 PCDHAC1Q9H158 963 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 SEC14L4Q9UDX3 406 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 MYH7BA7E2Y1 1941 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 TRPM1Q7Z4N2 1603 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 FTCDNL1E5RQL4 147 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 GCH1P30793 250 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 GRIA2P42262 883 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 RPS13P62277 151 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 SNRPD2P62316 118 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 IRF9Q00978 393 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 INTS5Q6P9B9 1019 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 SHISA6Q6ZSJ9 500 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 TMCO2Q7Z6W1 182 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 UEVLDQ8IX04 471 aa15.25■□□□□ 0.03
CACNA1A-202ENST00000573710 LRRN4CLQ8ND94 238 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms