RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SP140Q13342 867 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 ZNF791Q3KP31 576 aaPredicted RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 WDR45BQ5MNZ6 344 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 BCL2L15Q5TBC7 163 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 XKRXQ6PP77 449 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 LINGO2Q7L985 606 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.07□□□□□ -0.8
USB1-212ENST00000566082 SLC30A8Q8IWU4 369 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 C2orf15Q8WU43 125 aaKnown RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 MRPL48Q96GC5 212 aaKnown RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 TMEM19Q96HH6 336 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 SECISBP2Q96T21 854 aaKnown RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 DPCDQ9BVM2 203 aaPredicted RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 SMG9Q9H0W8 520 aaKnown RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 ARID1BQ8NFD5 2236 aaPredicted RBP10.06□□□□□ -0.8
USB1-212ENST00000566082 C2orf92A0A1B0GVN3 265 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 KMOO15229 486 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ADAP00813 363 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 PRR35P0CG20 571 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ACPPP15309 386 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 IFITM3Q01628 133 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 PRSS36Q5K4E3 855 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ADNP2Q6IQ32 1131 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ANKRD54Q6NXT1 300 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 SLC27A4Q6P1M0 643 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 C22orf39Q6P5X5 142 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ZNF613Q6PF04 617 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 CRTC1Q6UUV9 634 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 RNF44Q7L0R7 432 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 BCDIN3DQ7Z5W3 292 aaKnown RBP10.06□□□□□ -0.8
USB1-212ENST00000566082 NPAS4Q8IUM7 802 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 FAM98AQ8NCA5 519 aaKnown RBP10.06□□□□□ -0.8
USB1-212ENST00000566082 OR4K5Q8NGD3 323 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 CYB5D2Q8WUJ1 264 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 SLC35B4Q969S0 331 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 SPATA9Q9BWV2 254 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 CDADC1Q9BWV3 514 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 BAIAP2Q9UQB8 552 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 KLK4Q9Y5K2 254 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 SPACA6W5XKT8 324 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 A0A1W2PPK0 400 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ANHXE9PGG2 379 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 FAAHO00519 579 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 PEX11BO96011 259 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 C8orf89P0DMQ9 161 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 TBPL1P62380 186 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 CDK10Q15131 360 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 OR2G6Q5TZ20 316 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 SLC36A4Q6YBV0 504 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 VASH1Q7L8A9 365 aaPredicted RBP10.06□□□□□ -0.8
USB1-212ENST00000566082 ZNF438Q7Z4V0 828 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 MRPL10Q7Z7H8 261 aaKnown RBP10.06□□□□□ -0.8
USB1-212ENST00000566082 KLBQ86Z14 1044 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 CXorf40AQ8TE69 158 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 SLC5A11Q8WWX8 675 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 MYEOVQ96EZ4 313 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 IL17FQ96PD4 163 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 PFDN2Q9UHV9 154 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ZNF639Q9UID6 485 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 M0R3H8 397 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 TSPAN12O95859 305 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 GSTM3P21266 225 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 RPS19P39019 145 aaKnown RBP10.06□□□□□ -0.8
USB1-212ENST00000566082 CCR4P51679 360 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ZNF91Q05481 1191 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 LMAN2Q12907 356 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 SLAMF1Q13291 335 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 SLC5A12Q1EHB4 618 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ZNF311Q5JNZ3 666 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 MEDAGQ5VYS4 303 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 C6orf120Q7Z4R8 191 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 CHPFQ8IZ52 775 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ZNF655Q8N720 491 aaPredicted RBP10.06□□□□□ -0.8
USB1-212ENST00000566082 RFT1Q96AA3 541 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 C12orf66Q96MD2 445 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 ERMAPQ96PL5 475 aaPredicted RBP10.06□□□□□ -0.8
USB1-212ENST00000566082 IFT27Q9BW83 186 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 PLSCR3Q9NRY6 295 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 CLEC2DQ9UHP7 191 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 OSGIN1Q9UJX0 560 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 PPIEQ9UNP9 301 aaKnown RBP10.06□□□□□ -0.8
USB1-212ENST00000566082 Q9Y3F1 56 aa10.06□□□□□ -0.8
USB1-212ENST00000566082 TAF1LQ8IZX4 1826 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 KCNK2O95069 426 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 APEX1P27695 318 aaKnown RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 AOAHP28039 575 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 GPR19Q15760 415 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 GDPGP1Q6ZNW5 385 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 RFLNAQ6ZTI6 216 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 BHLHA9Q7RTU4 235 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 NUDT13Q86X67 352 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 SNX33Q8WV41 574 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 PCNPQ8WW12 178 aaKnown RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 FKBP10Q96AY3 582 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 GINS4Q9BRT9 223 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 C1QTNF3Q9BXJ4 246 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 BTBD1Q9H0C5 482 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 RRAGCQ9HB90 399 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 NDUFAF4Q9P032 175 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 TTC3P53804 2025 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms