RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	MAGEA8	P43361	318 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	CCT3	P49368	545 aa	Known RBP	10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	HLCS	P50747	726 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	CCR5	P51681	352 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	CDH12	P55289	794 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	NUP107	P57740	925 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	PRR5	P85299	388 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	VLDLR	P98155	873 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	PPP1R8	Q12972	351 aa	Known RBP	10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	SLAMF1	Q13291	335 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	NEDD8	Q15843	81 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	SAXO2	Q658L1	398 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006		Q6ZSR6	202 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	CCDC80	Q76M96	950 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	ASCL5	Q7RTU5	278 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZNF551	Q7Z340	670 aa	Predicted RBP	10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	MMP21	Q8N119	569 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	SLC44A3	Q8N4M1	653 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	METTL25	Q8N6Q8	603 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	PIK3C3	Q8NEB9	887 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	TSTD1	Q8NFU3	115 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	OR56A1	Q8NGH5	318 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	MPP4	Q96JB8	637 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	SPATA5L1	Q9BVQ7	753 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	CXorf36	Q9H7Y0	433 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	POLR1B	Q9H9Y6	1135 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	C3orf14	Q9HBI5	128 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	SLC24A3	Q9HC58	644 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	SLC35C2	Q9NQQ7	365 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	THSD1	Q9NS62	852 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZCCHC3	Q9NUD5	404 aa	Known RBP	10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	TEX10	Q9NXF1	929 aa	Predicted RBP	10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	FBXW2	Q9UKT8	454 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	TMCC3	Q9ULS5	477 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	CYP8B1	Q9UNU6	501 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	TPRKB	Q9Y3C4	175 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZNF451	Q9Y4E5	1061 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	PCDHGA4	Q9Y5G9	962 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	MAGED1	Q9Y5V3	778 aa	Predicted RBP	10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	HS3ST3A1	Q9Y663	406 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	OR5K4	A6NMS3	321 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	C2orf74	A8MZ97	194 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006		H0Y8X5	98 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	BTN3A3	O00478	584 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	DPM1	O60762	260 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	FAM20B	O75063	409 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	NDUFS2	O75306	463 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	OR6B1	O95007	311 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	FUCA1	P04066	466 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	SEMG1	P04279	462 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ANXA8	P13928	327 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	IL7R	P16871	459 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	CSNK2A2	P19784	350 aa	Predicted RBP	10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	PRKACG	P22612	351 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ELK4	P28324	431 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	TLX1	P31314	330 aa	Predicted RBP	10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ALDH3B2	P48448	385 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	BLK	P51451	505 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	KCNJ10	P78508	379 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	KCNC4	Q03721	635 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	KEAP1	Q14145	624 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	SUZ12	Q15022	739 aa	Known RBP	10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZIC1	Q15915	447 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ALG11	Q2TAA5	492 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZBED5	Q49AG3	693 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ATAD3B	Q5T9A4	648 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZNF691	Q5VV52	312 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	TMEM92	Q6UXU6	159 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ABHD13	Q7L211	337 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	C6orf120	Q7Z4R8	191 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	TAF8	Q7Z7C8	310 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	NRROS	Q86YC3	692 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	DCP2	Q8IU60	420 aa	Known RBP	10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	SAMD14	Q8IZD0	417 aa	Predicted RBP	10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ADGRF3	Q8IZF5	1079 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	TTC29	Q8NA56	475 aa	Predicted RBP	10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	AVL9	Q8NBF6	648 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	CAMKV	Q8NCB2	501 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	OR10G2	Q8NGC3	310 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	OR8K5	Q8NH50	307 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZCCHC10	Q8TBK6	192 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	CREB3L4	Q8TEY5	395 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	PHF10	Q8WUB8	498 aa	Known RBP	10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	TAMM41	Q96BW9	452 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	MS4A6E	Q96DS6	147 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	THAP11	Q96EK4	314 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	NRTN	Q99748	197 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	CCDC3	Q9BQI4	270 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZNF717	Q9BY31	904 aa	Predicted RBP	10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	CCDC90B	Q9GZT6	254 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	TMEM168	Q9H0V1	697 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	CCNB1IP1	Q9NPC3	277 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	POT1	Q9NUX5	634 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	VNN3	Q9NY84	501 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	SPHK1	Q9NYA1	384 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	C5AR2	Q9P296	337 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	SEC14L3	Q9UDX4	400 aa		10.21	□□□□□ -0.77
SPIDR-222	ENST00000524006	POFUT2	Q9Y2G5	429 aa		10.21	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms