RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 TBL3Q12788 808 aaKnown RBP17.29■□□□□ 0.36
CHTOP-202ENST00000368687 ACSM2BQ68CK6 577 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 RPUSD3Q6P087 351 aaKnown RBP17.29■□□□□ 0.36
CHTOP-202ENST00000368687 ATCAYQ86WG3 371 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 ST13P4Q8IZP2 240 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-202ENST00000368687 ARMC10Q8N2F6 343 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 Q8NA96 180 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 APCDD1LQ8NCL9 501 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 CPT1CQ8TCG5 803 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 ANKRD9Q96BM1 317 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-202ENST00000368687 PKNOX2Q96KN3 472 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 ZIM3Q96PE6 472 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 SHCBP1LQ9BZQ2 653 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHTOP-202ENST00000368687 MCM8Q9UJA3 840 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 PCDHGA10Q9Y5H3 936 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 UBR5O95071 2799 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-202ENST00000368687 FLNBO75369 2602 aaKnown RBP17.29■□□□□ 0.36
CHTOP-202ENST00000368687 A0A1W2PR48 441 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 C1orf226A1L170 272 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 TGFBR3LH3BV60 316 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 CTIFO43310 598 aaKnown RBP17.28■□□□□ 0.36
CHTOP-202ENST00000368687 TYROBPO43914 113 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 FGF17O60258 216 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 SPAG7O75391 227 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 WISP1O95388 367 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 GPR75O95800 540 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 AIFM1O95831 613 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 ALOX15P16050 662 aaPredicted RBP17.28■□□□□ 0.36
CHTOP-202ENST00000368687 TNNI3P19429 210 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 TPP2P29144 1249 aaPredicted RBP17.28■□□□□ 0.36
CHTOP-202ENST00000368687 FOLH1Q04609 750 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 IMPG1Q17R60 797 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 PLEKHN1Q494U1 663 aaPredicted RBP17.28■□□□□ 0.36
CHTOP-202ENST00000368687 NDUFAF5Q5TEU4 345 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 C18orf63Q68DL7 685 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 RNF165Q6ZSG1 346 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 RPS19BP1Q86WX3 136 aaKnown RBP17.28■□□□□ 0.36
CHTOP-202ENST00000368687 OR8K3Q8NH51 312 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 UTP23Q9BRU9 249 aaKnown RBP17.28■□□□□ 0.36
CHTOP-202ENST00000368687 ACPTQ9BZG2 426 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHTOP-202ENST00000368687 CENPHQ9H3R5 247 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 RRAGDQ9NQL2 400 aaPredicted RBP17.28■□□□□ 0.36
CHTOP-202ENST00000368687 PSME2Q9UL46 239 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 PCDHGB6Q9Y5F9 930 aa17.28■□□□□ 0.36
CHTOP-202ENST00000368687 A8MUA0 341 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 C17orf105B2RV13 164 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 UBFD1O14562 309 aaKnown RBP17.27■□□□□ 0.36
CHTOP-202ENST00000368687 OR10H2O60403 315 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 ZFAND5O76080 213 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 SNUPNO95149 360 aaKnown RBP17.27■□□□□ 0.36
CHTOP-202ENST00000368687 WDPCPO95876 746 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 PIK3R1P27986 724 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 ALDH3A1P30838 453 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 FOXK1P85037 733 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 INPP5JQ15735 1006 aaPredicted RBP17.27■□□□□ 0.36
CHTOP-202ENST00000368687 GALNT18Q6P9A2 607 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 HSDL2Q6YN16 418 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 TRIM46Q7Z4K8 759 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 CUZD1Q86UP6 607 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 CRLF3Q8IUI8 442 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 C1orf52Q8N6N3 182 aaKnown RBP17.27■□□□□ 0.36
CHTOP-202ENST00000368687 OR1N1Q8NGS0 311 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 FAM76AQ8TAV0 307 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 PTPMT1Q8WUK0 201 aaPredicted RBP17.27■□□□□ 0.36
CHTOP-202ENST00000368687 CHTF18Q8WVB6 975 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 NCLNQ969V3 563 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 GATA5Q9BWX5 397 aaPredicted RBP17.27■□□□□ 0.36
CHTOP-202ENST00000368687 C12orf65Q9H3J6 166 aaKnown RBP17.27■□□□□ 0.36
CHTOP-202ENST00000368687 AGPAT4Q9NRZ5 378 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 SIRT5Q9NXA8 310 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 SLC17A7Q9P2U7 560 aa17.27■□□□□ 0.36
CHTOP-202ENST00000368687 TRBV11-1A0A0K0K1C0 115 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 AZIN1O14977 448 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 RSL1D1O76021 490 aaKnown RBP17.26■□□□□ 0.35
CHTOP-202ENST00000368687 ZWINTO95229 277 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 GBAP04062 536 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 SLC35E2P0CK97 266 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 NEFHP12036 1026 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 GPR143P51810 404 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 MLLT10P55197 1068 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 SPRED3Q2MJR0 410 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 TNFAIP8L3Q5GJ75 292 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 TCHHL1Q5QJ38 904 aaPredicted RBP17.26■□□□□ 0.35
CHTOP-202ENST00000368687 BEND6Q5SZJ8 279 aaPredicted RBP17.26■□□□□ 0.35
CHTOP-202ENST00000368687 C6orf163Q5TEZ5 329 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 SAMD14Q8IZD0 417 aaPredicted RBP17.26■□□□□ 0.35
CHTOP-202ENST00000368687 KIRREL3Q8IZU9 778 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 BEST3Q8N1M1 668 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 OR4K14Q8NGD5 310 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 OR5L2Q8NGL0 311 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 MIB2Q96AX9 1013 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 HBEGFQ99075 208 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 WBP11Q9Y2W2 641 aaKnown RBP17.26■□□□□ 0.35
CHTOP-202ENST00000368687 TIMM22Q9Y584 194 aa17.26■□□□□ 0.35
CHTOP-202ENST00000368687 SETXQ7Z333 2677 aaKnown RBP17.25■□□□□ 0.35
CHTOP-202ENST00000368687 RELNP78509 3460 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 GNG14A0A1W2PPG7 69 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 GABRR3A8MPY1 467 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms