RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC37A3Q8NCC5 494 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 SECISBP2Q96T21 854 aaKnown RBP16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 RMI1Q9H9A7 625 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 SDHAF3Q9NRP4 125 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 ACSL6Q9UKU0 697 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF726A6NNF4 738 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 DBIP07108 87 aaKnown RBP16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 GCGRP47871 477 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 RAB28P51157 221 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 ACTC1P68032 377 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 ACTA1P68133 377 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 MC1RQ01726 317 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 RPA4Q13156 261 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 PMS2P3Q13401 168 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 FLYWCH1Q4VC44 716 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 UGT2A3Q6UWM9 527 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 ALKAL1Q6UXT8 129 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 HCAR2Q8TDS4 363 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 BRF2Q9HAW0 419 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 PRODH2Q9UF12 536 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 NPIPB15A6NHN6 443 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 RTCAO00442 366 aaKnown RBP16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 KAT7O95251 611 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 GNSP15586 552 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 PGBD2Q6P3X8 592 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 PLEKHG7Q6ZR37 379 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 MDGA1Q8NFP4 955 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 FANK1Q8TC84 345 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 NETO1Q8TDF5 533 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 S100A16Q96FQ6 103 aaKnown RBP16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC30A3Q99726 388 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 TAS2R10Q9NYW0 307 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 GNG8Q9UK08 70 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 A0A1W2PP55 124 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 BLOC1S5-TXNDC5H3BN57 136 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 AK1P00568 194 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 PRDX3P30048 256 aaKnown RBP16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 ARFRP1Q13795 201 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF267Q14586 743 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 OR52E8Q6IFG1 317 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 CLEC14AQ86T13 490 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 CHST14Q8NCH0 376 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 OR2L5Q8NG80 312 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 SHKBP1Q8TBC3 707 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 C16orf78Q8WTQ4 265 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 SMARCD2Q92925 531 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 LRR1Q96L50 414 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 UBXN10Q96LJ8 280 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 E7EQ34 232 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 SOCS7O14512 581 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 VILLO15195 856 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 TGM5O43548 720 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 KIAA0513O60268 411 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 HTR1AP08908 422 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 CTSAP10619 480 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 GJA5P36382 358 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 RBM34P42696 430 aaKnown RBP16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 ID2Q02363 134 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 DEFB134Q4QY38 66 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 KIAA0319Q5VV43 1072 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 TMEM17Q86X19 198 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 SNX29P2Q8IUI4 249 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 DCAF13Q9NV06 445 aaKnown RBP16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF639Q9UID6 485 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 BTNL2Q9UIR0 455 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 MYH4Q9Y623 1939 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC19A2O60779 497 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 GPR37L1O60883 481 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 KCNJ13O60928 360 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 GP1BBP13224 206 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 GRM2Q14416 872 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 SEC23BQ15437 767 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 RAB30Q15771 203 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 AAK1Q2M2I8 961 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 GALNT12Q8IXK2 581 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 SIX5Q8N196 739 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 LRRC25Q8N386 305 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC5A8Q8N695 610 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 PNLDC1Q8NA58 520 aaKnown RBP16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 ECHDC3Q96DC8 303 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 TMEM19Q96HH6 336 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 SAMD11Q96NU1 681 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 P2RY13Q9BPV8 354 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 B3GNT4Q9C0J1 378 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 C20orf27Q9GZN8 174 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 ACTL7AQ9Y615 435 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 INMT-MINDY4F8WBC2 141 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 PPM1BO75688 479 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 TFPTP0C1Z6 253 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 STOMP27105 288 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 AFF1P51825 1210 aaKnown RBP16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF234Q14588 700 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF627Q7L945 461 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 TEX26Q8N6G2 289 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 ACVR1CQ8NER5 493 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 OR52P1PQ8NH57 321 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 NT5C3BQ969T7 300 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 ISG20Q96AZ6 181 aaKnown RBP16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC39A13Q96H72 371 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms