RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 HTR3AP46098 478 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 DGKGP49619 791 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ZNF91Q05481 1191 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 GPR50Q13585 617 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 GRIN2CQ14957 1233 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SPHARQ15513 63 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 OCLNQ16625 522 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 NDUFA5Q16718 116 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 RPS26P11Q5JNZ5 115 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 MFSD4BQ5TF39 518 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TMIGD1Q6UXZ0 262 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 CCDC149Q6ZUS6 474 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 PARS2Q7L3T8 475 aaKnown RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 ANKRD33Q7Z3H0 272 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 CFAP206Q8IYR0 622 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 UBQLNLQ8IYU4 475 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ADGRF3Q8IZF5 1079 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 CLIP4Q8N3C7 705 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 NANOGP1Q8N7R0 232 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 PROKR2Q8NFJ6 384 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 OR8J1Q8NGP2 316 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 OR6F1Q8NGZ6 308 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SETD7Q8WTS6 366 aaKnown RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 CYB5D2Q8WUJ1 264 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SORCS1Q8WY21 1168 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 OR5P2Q8WZ92 322 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TP53INP1Q96A56 240 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TRMT61AQ96FX7 289 aaKnown RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 TMEM80Q96HE8 168 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TMEM19Q96HH6 336 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 LINC00615Q96LM1 132 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 MND1Q9BWT6 205 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SORBS1Q9BX66 1292 aaKnown RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 CFHR5Q9BXR6 569 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 LINC00597Q9H2U6 94 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 MTG2Q9H4K7 406 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 PRM3Q9NNZ6 103 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ERVK13-1Q9NX77 482 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 DNAJC27Q9NZQ0 273 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 CLEC2DQ9UHP7 191 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TMCC3Q9ULS5 477 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ITM2BQ9Y287 266 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 WBP11Q9Y2W2 641 aaKnown RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 GRIP1Q9Y3R0 1128 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 PCDHGB2Q9Y5G2 931 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SNX8Q9Y5X2 465 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 IQCMA0A1B0GVH7 501 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 HEPACAM2A8MVW5 462 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 C5orf58C9J3I9 102 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 PLPP1O14494 284 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 PI15O43692 258 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 B4GALT2O60909 372 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 CCNKO75909 580 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 PDE9AO76083 593 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 GNRH1P01148 92 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 BCHEP06276 602 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 H1F0P07305 194 aaKnown RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 IGFBP1P08833 259 aaPredicted RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 S100A1P23297 94 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 RCVRNP35243 200 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 SOX3P41225 446 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 FRKP42685 505 aaPredicted RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 RFX2P48378 723 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 KCNJ5P48544 419 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 DGKEP52429 567 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 NKX2-5P52952 324 aaPredicted RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 EPHA5P54756 1037 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 RPS26P62854 115 aaKnown RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 PSPHP78330 225 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 MLLT11Q13015 90 aaPredicted RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 NOGQ13253 232 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 TSTA3Q13630 321 aaPredicted RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 ZNF79Q15937 498 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 LY6G5CQ5SRR4 150 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 SLC25A30Q5SVS4 291 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 DCST1Q5T197 706 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 ZNF544Q6NX49 715 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 PGBD2Q6P3X8 592 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 LCTLQ6UWM7 567 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 CD300LDQ6UXZ3 194 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 ZNF765Q7L2R6 523 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 WDR53Q7Z5U6 358 aaPredicted RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 TRIM69Q86WT6 500 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 MMAAQ8IVH4 418 aaKnown RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 ZNF547Q8IVP9 402 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 SLC7A5P1Q8MH63 180 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 NATD1Q8N6N6 113 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 FAM181AQ8N9Y4 354 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 VANGL1Q8TAA9 524 aaPredicted RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 ZNF764Q96H86 408 aaPredicted RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 CEP19Q96LK0 163 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 ZNF354BQ96LW1 612 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 CNPPD1Q9BV87 410 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 ZCCHC2Q9C0B9 1178 aaKnown RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 OR2AG1Q9H205 316 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 RHBGQ9H310 441 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 NEK6Q9HC98 313 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 NEUROD4Q9HD90 331 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 SIRT3Q9NTG7 399 aaPredicted RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 SAGE1Q9NXZ1 904 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms