RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 FAF1Q9UNN5 650 aaPredicted RBP21.42■■□□□ 1.02
CDX1-201ENST00000231656 KLK4Q9Y5K2 254 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 UNC13CQ8NB66 2214 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 CUL9Q8IWT3 2517 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 MYOCOSA0A1B0GUC4 107 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 OR2A25A4D2G3 310 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 SIGLEC6O43699 453 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 SNAP29O95721 258 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 CAPGP40121 348 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 SPIDRQ14159 915 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 FCRL6Q6DN72 434 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 LAIR1Q6GTX8 287 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 ZNF793Q6ZN11 406 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 ZDHHC13Q8IUH4 622 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 ZDHHC21Q8IVQ6 265 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 DHRSXQ8N5I4 330 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 MFSD9Q8NBP5 474 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 C17orf62Q9BQA9 187 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 ASPSCR1Q9BZE9 553 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 SYNPO2LQ9H987 977 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 IL1RAPQ9NPH3 570 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 TEX10Q9NXF1 929 aaPredicted RBP21.41■■□□□ 1.02
CDX1-201ENST00000231656 RAPGEFL1Q9UHV5 662 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 C4orf51C9J302 202 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 GNGT2O14610 69 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 PCDHGA12O60330 932 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 GCM2O75603 506 aaPredicted RBP21.41■■□□□ 1.02
CDX1-201ENST00000231656 PVRP15151 417 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 FRKP42685 505 aaPredicted RBP21.41■■□□□ 1.02
CDX1-201ENST00000231656 CRATP43155 626 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 GPR3P46089 330 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 PLA2G16P53816 162 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 OR1D5P58170 312 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 ADARB1P78563 741 aaKnown RBP21.41■■□□□ 1.02
CDX1-201ENST00000231656 FADDQ13158 208 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 APOFQ13790 326 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 MYBPC3Q14896 1274 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 GCNT6Q5T4J0 391 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 KRT80Q6KB66 452 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 TMEM179BQ7Z7N9 219 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 TBC1D19Q8N5T2 526 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 CYGBQ8WWM9 190 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 OR5P2Q8WZ92 322 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 MS4A6EQ96DS6 147 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 KLHL25Q9H0H3 589 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 CXorf36Q9H7Y0 433 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 C1GALT1Q9NS00 363 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 ANKMY1Q9P2S6 941 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 PCDHGA4Q9Y5G9 962 aa21.41■■□□□ 1.02
CDX1-201ENST00000231656 A0A0G2JN53 185 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 PDPK1O15530 556 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 STATHP02808 62 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 DDX5P17844 614 aaKnown RBP21.4■■□□□ 1.02
CDX1-201ENST00000231656 UQCRC2P22695 453 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 DCTP40126 519 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 SSR2P43308 183 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 ALDH9A1P49189 494 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 PCBP4P57723 403 aaKnown RBP21.4■■□□□ 1.02
CDX1-201ENST00000231656 NR1D2Q14995 579 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 FAM180BQ6P0A1 224 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 ANGPTL8Q6UXH0 198 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 VTCN1Q7Z7D3 282 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 EID2Q8N6I1 236 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 FAM181AQ8N9Y4 354 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 OR5AK3PQ8NH89 298 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 OR5K1Q8NHB7 308 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 TBC1D20Q96BZ9 403 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 FBXL20Q96IG2 436 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 HSH2DQ96JZ2 352 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 MRPS26Q9BYN8 205 aaKnown RBP21.4■■□□□ 1.02
CDX1-201ENST00000231656 USE1Q9NZ43 259 aa21.4■■□□□ 1.02
CDX1-201ENST00000231656 IGHV1OR21-1A0A087WYE8 117 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 LY6G6EA0A0G2JKS1 128 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 H3BNH8 94 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 KRT75O95678 551 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 NELFEP18615 380 aaKnown RBP21.39■■□□□ 1.01
CDX1-201ENST00000231656 SOAT1P35610 550 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 CHI3L1P36222 383 aaPredicted RBP21.39■■□□□ 1.01
CDX1-201ENST00000231656 PPM1FP49593 454 aaPredicted RBP21.39■■□□□ 1.01
CDX1-201ENST00000231656 CASP9P55211 416 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 RPS15AP62244 130 aaKnown RBP21.39■■□□□ 1.01
CDX1-201ENST00000231656 PPP2R2BQ00005 443 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 EEF1A2Q05639 463 aaKnown RBP21.39■■□□□ 1.01
CDX1-201ENST00000231656 RBBP4Q09028 425 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 NKAIN2Q5VXU1 208 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 FBXO42Q6P3S6 717 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 TRIM40Q6P9F5 258 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 USP51Q70EK9 711 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 RNF130Q86XS8 419 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 HS3ST5Q8IZT8 346 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 BAHD1Q8TBE0 780 aaPredicted RBP21.39■■□□□ 1.01
CDX1-201ENST00000231656 SDCCAG3Q96C92 435 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 MACROD1Q9BQ69 325 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 OSBPL10Q9BXB5 764 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 TMEM121BQ9BXQ6 578 aaPredicted RBP21.39■■□□□ 1.01
CDX1-201ENST00000231656 FAM192AQ9GZU8 254 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 RAD21L1Q9H4I0 556 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 TMEM38AQ9H6F2 299 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 VNN3Q9NY84 501 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 ABCG2Q9UNQ0 655 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms