RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 LIPKQ5VXJ0 399 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ZFAND4Q86XD8 727 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 STRADBQ9C0K7 418 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SOX17Q9H6I2 414 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 PCDHB3Q9Y5E6 796 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ABCC6O95255 1503 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 VEGFDO43915 354 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 CSF2P04141 144 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 FBLP22087 321 aaKnown RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 LMAN2Q12907 356 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 GRIK2Q13002 908 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 UPP1Q16831 310 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 RPL13AP3Q6NVV1 102 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF584Q8IVC4 421 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 NEIL3Q8TAT5 605 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SMARCD2Q92925 531 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 GLYATL1Q969I3 302 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 KIAA1143Q96AT1 154 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 PTCHD1Q96NR3 888 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF701Q9NV72 531 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 NUFIP1Q9UHK0 495 aaKnown RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SLC7A11Q9UPY5 501 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF142P52746 1687 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 H0YAE9 185 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 TP53I11O14683 189 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 GSRP00390 522 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 F2P00734 622 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 UGT2B10P36537 528 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 DPP6P42658 865 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF45Q02386 682 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 LRP8Q14114 963 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 CLCA4Q14CN2 919 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 FAM214AQ32MH5 1076 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF829Q3KNS6 432 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 KCTD18Q6PI47 426 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SCGB1C1Q8TD33 95 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 NECAB3Q96P71 396 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 TXNRD2Q9NNW7 524 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 HSPB11Q9Y547 144 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SH3PXD2BA1X283 911 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 EMC8O43402 210 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 RPS3P23396 243 aaKnown RBP eCLIP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 TIA1P31483 386 aaKnown RBP eCLIP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 LEPRP48357 1165 aaKnown RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 XKRXQ6PP77 449 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 TMEM107Q6UX40 140 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 CENPSQ8N2Z9 138 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 OR56A3Q8NH54 315 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 MEAF6Q9HAF1 191 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 SPHK2Q9NRA0 654 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 ARFGEF2Q9Y6D5 1785 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 BEST1O76090 585 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 RASAL1O95294 804 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 GJB5O95377 273 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 SNAP29O95721 258 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 SFTPBP07988 381 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 LRRC37A5PQ49AS3 106 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 TECRLQ5HYJ1 363 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 DCDC5Q6ZRR9 648 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 MSLNLQ96KJ4 702 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 MUS81Q96NY9 551 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 P2RY13Q9BPV8 354 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 ARHGAP9Q9BRR9 750 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 ADAMTS6Q9UKP5 1117 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 COL1A1P02452 1464 aaPredicted RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 IFNA2P01563 188 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 CELP19835 753 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 CD40LGP29965 261 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 CD97P48960 835 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 PGGT1BP53609 377 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 ACTC1P68032 377 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 ACTA1P68133 377 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 ALG10BQ5I7T1 473 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 TAS1R3Q7RTX0 852 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 ENDOVQ8N8Q3 282 aaKnown RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 OR13C3Q8NGS6 347 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 COQ8AQ8NI60 647 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 DNAJA3Q96EY1 480 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 MRGPRX2Q96LB1 330 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 SLC6A7Q99884 636 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 MMP27Q9H306 513 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 EPHA6Q9UF33 1036 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 TFPTP0C1Z6 253 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 HRH2P25021 359 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 STK19P49842 368 aaPredicted RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 PLEKHN1Q494U1 663 aaPredicted RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 TMEM69Q5SWH9 247 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 C6orf183Q5T699 404 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 C6orf89Q6UWU4 347 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 CEACAM19Q7Z692 300 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 HMGN2P46Q86SG4 172 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 PHC2Q8IXK0 858 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 TSPEARQ8WU66 669 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 RAB7BQ96AH8 199 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 PPP4R1LQ9P1A2 415 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 MAB21L2Q9Y586 359 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 CACNA1FO60840 1977 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 A0A1W2PPW3 197 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms