RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	DCDC1	P59894	354 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	RHOA	P61586	193 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	GPLD1	P80108	840 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	PITPNA	Q00169	270 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	ZNF91	Q05481	1191 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	BCL2L1	Q07817	233 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	MAP4K2	Q12851	820 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CHIT1	Q13231	466 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	MINDY4	Q4G0A6	757 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	SGO1	Q5FBB7	561 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	MPP7	Q5T2T1	576 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	KLHL17	Q6TDP4	642 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	TPGS1	Q6ZTW0	290 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	USP30	Q70CQ3	517 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	USP50	Q70EL3	339 aa	Predicted RBP	11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	ADGRG3	Q86Y34	549 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	ADGRF3	Q8IZF5	1079 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CADM2	Q8N3J6	435 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	AQP11	Q8NBQ7	271 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	OR8K5	Q8NH50	307 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	LRRC20	Q8TCA0	184 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	UBASH3B	Q8TF42	649 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	C15orf40	Q8WUR7	153 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	EGLN2	Q96KS0	407 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	NEDD4L	Q96PU5	975 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	SLC38A2	Q96QD8	506 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	SPON2	Q9BUD6	331 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	PRR14	Q9BWN1	585 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	BTBD1	Q9H0C5	482 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	PPA2	Q9H2U2	334 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	RC3H2	Q9HBD1	1191 aa	Known RBP	11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	INPP5E	Q9NRR6	644 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	FARSB	Q9NSD9	589 aa	Known RBP	11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	MAT2B	Q9NZL9	334 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	MARK1	Q9P0L2	795 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	LHX3	Q9UBR4	397 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CYB5R1	Q9UHQ9	305 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	TMPRSS11E	Q9UL52	423 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	MAFF	Q9ULX9	164 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CDH10	Q9Y6N8	788 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	SESN1	Q9Y6P5	492 aa		11.22	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	C12orf71	A8MTZ7	269 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	PLD2	O14939	933 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	TEX28	O15482	410 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	EFCAB14	O75071	495 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CPNE3	O75131	537 aa	Known RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	DUSP11	O75319	330 aa	Known RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	ENTPD6	O75354	484 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	SERPINI2	O75830	405 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CPSF4	O95639	269 aa	Known RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CAT	P04040	527 aa	Known RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	RAF1	P04049	648 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	H1F0	P07305	194 aa	Known RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	ANXA4	P09525	319 aa	Predicted RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	TACR1	P25103	407 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	SERPINA4	P29622	427 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	GPC1	P35052	558 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	RFX3	P48380	749 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CDKN1C	P49918	316 aa	Predicted RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	RNF144A	P50876	292 aa	Predicted RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	TWF1	Q12792	350 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	TAF10	Q12962	218 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	MAP2K5	Q13163	448 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CARTPT	Q16568	116 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	PTCHD3	Q3KNS1	767 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	ENTPD8	Q5MY95	495 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	SLC22A10	Q63ZE4	541 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	HIST2H2AA3	Q6FI13	130 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	TEX261	Q6UWH6	196 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	PAMR1	Q6UXH9	720 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	TPRG1	Q6ZUI0	275 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	USP45	Q70EL2	814 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	TSEN54	Q7Z6J9	526 aa	Known RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CTU1	Q7Z7A3	348 aa	Known RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	ANKRD46	Q86W74	232 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	AMIGO1	Q86WK6	493 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	FAM20C	Q8IXL6	584 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	C10orf111	Q8N326	155 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	NAT16	Q8N8M0	369 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	DCBLD1	Q8N8Z6	715 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	OR7G3	Q8NG95	312 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	ADAMTS19	Q8TE59	1207 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	UBE2F	Q969M7	185 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	NACC2	Q96BF6	587 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	NIPSNAP1	Q9BPW8	284 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	TCF25	Q9BQ70	676 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	MRI1	Q9BV20	369 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	KATNB1	Q9BVA0	655 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	NLN	Q9BYT8	704 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	MED28	Q9H204	178 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	MIXL1	Q9H2W2	232 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	EVA1A	Q9H8M9	152 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	IL26	Q9NPH9	171 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	NCKAP1	Q9Y2A7	1128 aa		11.21	□□□□□ -0.61
U2AF1L4-221	ENST00000601236	ALG5	Q9Y673	324 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms