RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ABCB1P08183 1280 aaPredicted RBP19.65■□□□□ 0.74
PNKP-203ENST00000593946 ANKRD34CP0C6C1 535 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 CPN2P22792 545 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 HTR1EP28566 365 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 ERFP50548 548 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 OLR1P78380 273 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 SLC14A1Q13336 389 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 FAM53BQ14153 422 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 MLC1Q15049 377 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 SUMF1Q8NBK3 374 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 OR10A6Q8NH74 314 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 OR5P2Q8WZ92 322 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 ZBED6CLQ96FA7 236 aaPredicted RBP19.65■□□□□ 0.74
PNKP-203ENST00000593946 DPYSL5Q9BPU6 564 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 MUC13Q9H3R2 512 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 PRDM9Q9NQV7 894 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 BCAP29Q9UHQ4 241 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 USP22Q9UPT9 525 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 HYKKA2RU49 373 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 C1QCP02747 245 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 EMP3P54852 163 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 MANFP55145 182 aaKnown RBP19.64■□□□□ 0.73
PNKP-203ENST00000593946 COL9A2Q14055 689 aaPredicted RBP19.64■□□□□ 0.73
PNKP-203ENST00000593946 CALHM3Q86XJ0 350 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 C10orf111Q8N326 155 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 TRIML2Q8N7C3 387 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 BHLHE22Q8NFJ8 381 aaPredicted RBP19.64■□□□□ 0.73
PNKP-203ENST00000593946 OR9A4Q8NGU2 314 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 ZFP90Q8TF47 636 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 STMN2Q93045 179 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 CSF3RQ99062 836 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 SPRTNQ9H040 489 aaPredicted RBP19.64■□□□□ 0.73
PNKP-203ENST00000593946 TPT1P8Q9HAU6 139 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 NEUROD4Q9HD90 331 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 SEC16AO15027 2179 aa19.64■□□□□ 0.73
PNKP-203ENST00000593946 EVPLLA8MZ36 301 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 SGK494L7N484 410 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 FLRT2O43155 660 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 FOXS1O43638 330 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 PSMG1O95456 288 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 ZNF806P0C7X5 589 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 FOLR1P15328 257 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 GPX2P18283 190 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 PPIBP23284 216 aaKnown RBP19.63■□□□□ 0.73
PNKP-203ENST00000593946 GZMMP51124 257 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 OR4D2P58180 307 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 SKP1P63208 163 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 GRM7Q14831 915 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 GPR19Q15760 415 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 CLPPQ16740 277 aaPredicted RBP19.63■□□□□ 0.73
PNKP-203ENST00000593946 TMTC4Q5T4D3 741 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 NIPAL1Q6NVV3 410 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 ARHGAP22Q7Z5H3 698 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 CA13Q8N1Q1 262 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 HIPK4Q8NE63 616 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 OR5T3Q8NGG3 340 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 PSMA8Q8TAA3 256 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 CNRIP1Q96F85 164 aaPredicted RBP19.63■□□□□ 0.73
PNKP-203ENST00000593946 PIF1Q9H611 641 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 DCLRE1BQ9H816 532 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 IRAK4Q9NWZ3 460 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 ACTR3BQ9P1U1 418 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 EGFL7Q9UHF1 273 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 PCDHB3Q9Y5E6 796 aa19.63■□□□□ 0.73
PNKP-203ENST00000593946 MYO1GB0I1T2 1018 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 TMEM150CB9EJG8 249 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 RDH16O75452 317 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 KRT36O76013 467 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 LMNAP02545 664 aaKnown RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 NTSP30990 170 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 TLX1P31314 330 aaPredicted RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 CEBPEQ15744 281 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 ZNF551Q7Z340 670 aaPredicted RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 DHFR2Q86XF0 187 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 DTWD1Q8N5C7 304 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 OR2T12Q8NG77 320 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 AMDHD1Q96NU7 426 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 SLC35A5Q9BS91 424 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 GLIPR2Q9H4G4 154 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 RPF2Q9H7B2 306 aaKnown RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 RNPEPL1Q9HAU8 725 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 SPACA6W5XKT8 324 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 A0A0A6YYC8 382 aaPredicted RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 IGHV5-10-1A0A0J9YXX1 117 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 I3L1I5 382 aaPredicted RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 CYR61O00622 381 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 ARPC2O15144 300 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 ERAL1O75616 437 aaKnown RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 OR2B3O76000 313 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 NSA2O95478 260 aaKnown RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 ABHD18Q0P651 414 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 SF3A2Q15428 464 aaKnown RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 OR52E8Q6IFG1 317 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 LCN8Q6JVE9 175 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 PRR23CQ6ZRP0 262 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 CLEC4FQ8N1N0 589 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 SLC26A7Q8TE54 656 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 FAM120BQ96EK7 910 aaKnown RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 CNDP2Q96KP4 475 aaKnown RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 BBS4Q96RK4 519 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms