RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 KLHL1Q9NR64 748 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 NMRK1Q9NWW6 199 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 MS4A12Q9NXJ0 267 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 SLC17A7Q9P2U7 560 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 TRPS1Q9UHF7 1281 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 MID2Q9UJV3 735 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 ZNF225Q9UK10 706 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 COPG1Q9Y678 874 aaKnown RBP10.34□□□□□ -0.75
DDB1-222ENST00000543627 BSNQ9UPA5 3926 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 ZNF462Q96JM2 2506 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 NUP210LQ5VU65 1888 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 SPTA1P02549 2419 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 TLN1Q9Y490 2541 aaKnown RBP10.33□□□□□ -0.76
DDB1-222ENST00000543627 WDR91A4D1P6 747 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 CCDC151A5D8V7 595 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 C17orf105B2RV13 164 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 FGF17O60258 216 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 OR10H2O60403 315 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 MAN1A2O60476 641 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 WISP1O95388 367 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 CHN1P15882 459 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 CREB1P16220 341 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 BSGP35613 385 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 ALDH9A1P49189 494 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 HTR6P50406 440 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 CLCN2P51788 898 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 MAPK12P53778 367 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 HMGCS1Q01581 520 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 FOLH1Q04609 750 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 LCP2Q13094 533 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 ZNF169Q14929 603 aaPredicted RBP10.33□□□□□ -0.76
DDB1-222ENST00000543627 TLR1Q15399 786 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 IMPG1Q17R60 797 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 GGTA1PQ4G0N0 100 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 LIPMQ5VYY2 423 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 IGFL3Q6UXB1 125 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 Q6ZS92 163 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 PAGE2Q7Z2X7 111 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 ATCAYQ86WG3 371 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 RPS19BP1Q86WX3 136 aaKnown RBP10.33□□□□□ -0.76
DDB1-222ENST00000543627 SCUBE1Q8IWY4 988 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 TMEM132CQ8N3T6 1108 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 Q8NA96 180 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 CDC26Q8NHZ8 85 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 TCP10LQ8TDR4 215 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 NCLNQ969V3 563 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 SNRNP40Q96DI7 357 aaKnown RBP10.33□□□□□ -0.76
DDB1-222ENST00000543627 RBM18Q96H35 190 aaKnown RBP10.33□□□□□ -0.76
DDB1-222ENST00000543627 ZNF382Q96SR6 550 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 UTP23Q9BRU9 249 aaKnown RBP10.33□□□□□ -0.76
DDB1-222ENST00000543627 MECRQ9BV79 373 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 C1QTNF3Q9BXJ4 246 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 GSTO2Q9H4Y5 243 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 KCNK9Q9NPC2 374 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 ASF1BQ9NVP2 202 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 OXSMQ9NWU1 459 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 LYARQ9NX58 379 aaKnown RBP10.33□□□□□ -0.76
DDB1-222ENST00000543627 VPS29Q9UBQ0 182 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 RAB21Q9UL25 225 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 STK38LQ9Y2H1 464 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 PLLPQ9Y342 182 aa10.33□□□□□ -0.76
DDB1-222ENST00000543627 CFAP46Q8IYW2 2715 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 IGKV3D-11A0A0A0MRZ8 115 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 A0A0A6YYD5 115 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 A0A1W2PQ72 361 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 A0A1W2PR48 441 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 OR5H15A6NDH6 313 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 GABRR3A8MPY1 467 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 PGRMC2O15173 223 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 PROM1O43490 865 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 ERLIN1O75477 346 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 TUBBP07437 444 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 NR2F6P10588 404 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 NEFHP12036 1026 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 COX7A2P14406 83 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 ALDH3A1P30838 453 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 TSFMP43897 325 aaKnown RBP10.32□□□□□ -0.76
DDB1-222ENST00000543627 FOXA1P55317 472 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 PKNOX1P55347 436 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 TNFRSF17Q02223 184 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 SERTAD2Q14140 314 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 SPINK14Q6IE38 97 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 C16orf47Q6ZP98 133 aaPredicted RBP10.32□□□□□ -0.76
DDB1-222ENST00000543627 COMMD6Q7Z4G1 85 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 ZCCHC7Q8N3Z6 543 aaKnown RBP10.32□□□□□ -0.76
DDB1-222ENST00000543627 MREGQ8N565 214 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 C1orf52Q8N6N3 182 aaKnown RBP10.32□□□□□ -0.76
DDB1-222ENST00000543627 BANPQ8N9N5 519 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 B3GNT7Q8NFL0 401 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 MYRIPQ8NFW9 859 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 PPP1R14CQ8TAE6 165 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 RDH11Q8TC12 318 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 AGR3Q8TD06 166 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 TANKQ92844 425 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 DAZLQ92904 295 aaKnown RBP10.32□□□□□ -0.76
DDB1-222ENST00000543627 ANKRD9Q96BM1 317 aaPredicted RBP10.32□□□□□ -0.76
DDB1-222ENST00000543627 ZIM3Q96PE6 472 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 PAIP2Q9BPZ3 127 aaKnown RBP10.32□□□□□ -0.76
DDB1-222ENST00000543627 CNPPD1Q9BV87 410 aa10.32□□□□□ -0.76
DDB1-222ENST00000543627 DDX31Q9H8H2 851 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms