RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	SCARF2	Q96GP6	870 aa	Predicted RBP	10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZNF607	Q96SK3	696 aa		10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	MENT	Q9BUN1	341 aa		10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	IRF2BPL	Q9H1B7	796 aa		10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	CHST8	Q9H2A9	424 aa		10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	SOX17	Q9H6I2	414 aa	Predicted RBP	10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	ACSS1	Q9NUB1	689 aa	Predicted RBP	10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	EXD2	Q9NVH0	621 aa		10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	FAM118A	Q9NWS6	357 aa		10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	EHD3	Q9NZN3	535 aa		10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	P2RX2	Q9UBL9	471 aa		10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	RSL24D1	Q9UHA3	163 aa	Known RBP	10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	UTS2R	Q9UKP6	389 aa		10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	SPACA6	W5XKT8	324 aa		10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006	EP300	Q09472	2414 aa	Predicted RBP	10.24	□□□□□ -0.77
SPIDR-222	ENST00000524006		A0A0A6YYD5	115 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	POM121B	A6NF01	834 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	PROB1	E7EW31	1015 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	PRAMEF26	H0Y7S4	382 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	TNFRSF11B	O00300	401 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	MAN2B1	O00754	1011 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	DLGAP1	O14490	977 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	YY2	O15391	372 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	SLC28A2	O43868	658 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	TNFRSF21	O75509	655 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	IFNW1	P05000	195 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	BCHE	P06276	602 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	FES	P07332	822 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	NR2F6	P10588	404 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	F3	P13726	295 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	CTSE	P14091	401 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	GABRG2	P18507	467 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	AK4	P27144	223 aa	Predicted RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	RRM2	P31350	389 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	ACSL1	P33121	698 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	TSFM	P43897	325 aa	Known RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	PPM1F	P49593	454 aa	Predicted RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	NCBP2	P52298	156 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	DGKE	P52429	567 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	CASP9	P55211	416 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	CDH15	P55291	814 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	SELENOW	P63302	87 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	HPCA	P84074	193 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	SLC5A12	Q1EHB4	618 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZC3H12B	Q5HYM0	836 aa	Known RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	NDUFAF5	Q5TEU4	345 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	KIAA0895L	Q68EN5	471 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZNF773	Q6PK81	442 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZNF852	Q6ZMS4	543 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	USP51	Q70EK9	711 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	PIWIL3	Q7Z3Z3	882 aa	Known RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	ASPG	Q86U10	573 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	ARMC8	Q8IUR7	673 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	SLC44A2	Q8IWA5	706 aa	Predicted RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	HS3ST5	Q8IZT8	346 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	SFXN5	Q8TD22	340 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	GIPC3	Q8TF64	312 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	JPH3	Q8WXH2	748 aa	Predicted RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	GAL3ST3	Q96A11	431 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	RERG	Q96A58	199 aa	Predicted RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	MUS81	Q96NY9	551 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	MBOAT4	Q96T53	435 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	DDX31	Q9H8H2	851 aa	Known RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	KCNK12	Q9HB15	430 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	A4GALT	Q9NPC4	353 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	DDX18	Q9NVP1	670 aa	Known RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	SCN3B	Q9NY72	215 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	ANKMY1	Q9P2S6	941 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	TBC1D29	Q9UFV1	150 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	PHF11	Q9UIL8	331 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	SLC13A4	Q9UKG4	626 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	PSME2	Q9UL46	239 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	RAB23	Q9ULC3	237 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	EXO1	Q9UQ84	846 aa	Known RBP	10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	CA5B	Q9Y2D0	317 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	PADI2	Q9Y2J8	665 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	TESMIN	Q9Y4I5	508 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	PCDHGB3	Q9Y5G1	929 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	GMPPB	Q9Y5P6	360 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZNF780B	Q9Y6R6	833 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	F5	P12259	2224 aa		10.23	□□□□□ -0.77
SPIDR-222	ENST00000524006	TMEM131	Q92545	1883 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	LOC100130705	A0A1B0GUX0	176 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	LRIT2	A6NDA9	550 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	ENO4	A6NNW6	628 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	TMPRSS11D	O60235	418 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	ERAL1	O75616	437 aa	Known RBP	10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	SERPINB7	O75635	380 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	DIRAS1	O95057	198 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	STATH	P02808	62 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	TFAP2A	P05549	437 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	NR2F1	P10589	423 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	CYP4B1	P13584	511 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	ETS2	P15036	469 aa		10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	HIST1H1T	P22492	207 aa	Predicted RBP	10.22	□□□□□ -0.77
SPIDR-222	ENST00000524006	BUD31	P41223	144 aa	Predicted RBP	10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms