RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TPBGQ13641 420 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 ZNF385BQ569K4 471 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 C3orf38Q5JPI3 329 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 LIPKQ5VXJ0 399 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 ZDHHC20Q5W0Z9 365 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 TRIQKQ629K1 86 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 CXCL17Q6UXB2 119 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 ZNF852Q6ZMS4 543 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 CITED4Q96RK1 184 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 ZIC5Q96T25 663 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 KCNJ15Q99712 375 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 KATNB1Q9BVA0 655 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 TSSK6Q9BXA6 273 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 ZNF717Q9BY31 904 aaPredicted RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 NMRK2Q9NPI5 230 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 C11orf16Q9NQ32 467 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 MRPS18AQ9NVS2 196 aaKnown RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 DNAJC27Q9NZQ0 273 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 GULP1Q9UBP9 304 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 TESQ9UGI8 421 aaKnown RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 NDRG2Q9UN36 371 aaKnown RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 AUP1Q9Y679 476 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 PCNTO95613 3336 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 A0A1W2PQ72 361 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 IRGMA1A4Y4 181 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 FAAHO00519 579 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 ORC5O43913 435 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 GPR37L1O60883 481 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 ETHE1O95571 254 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 RAB36O95755 333 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 GSTM1P09488 218 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 HSPA14Q0VDF9 509 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 GANABQ14697 944 aaKnown RBP16.93■□□□□ 0.3
NUP54-205ENST00000507257 HEPACAMQ14CZ8 416 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 SF3A2Q15428 464 aaKnown RBP16.93■□□□□ 0.3
NUP54-205ENST00000507257 DUSP6Q16828 381 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 UNC5DQ6UXZ4 953 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 THOC6Q86W42 341 aaKnown RBP16.93■□□□□ 0.3
NUP54-205ENST00000507257 BPHLQ86WA6 291 aaPredicted RBP16.93■□□□□ 0.3
NUP54-205ENST00000507257 TRPV1Q8NER1 839 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 ATP6V1C2Q8NEY4 427 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 DNAJA4Q8WW22 397 aaPredicted RBP16.93■□□□□ 0.3
NUP54-205ENST00000507257 POLDIP3Q9BY77 421 aaKnown RBP16.93■□□□□ 0.3
NUP54-205ENST00000507257 TRIM45Q9H8W5 580 aaPredicted RBP16.93■□□□□ 0.3
NUP54-205ENST00000507257 SF3B6Q9Y3B4 125 aaKnown RBP16.93■□□□□ 0.3
NUP54-205ENST00000507257 ASB4Q9Y574 426 aa16.93■□□□□ 0.3
NUP54-205ENST00000507257 LINC00862A6NCI5 91 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 LEUTXA8MZ59 168 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 WWP2O00308 870 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 AP2A2O94973 939 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 SLC2A2P11168 524 aaPredicted RBP16.92■□□□□ 0.3
NUP54-205ENST00000507257 CYP2A6P11509 494 aaPredicted RBP16.92■□□□□ 0.3
NUP54-205ENST00000507257 POU1F1P28069 291 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 GSTM5P46439 218 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 MXD1Q05195 221 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 DUSP4Q13115 394 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 KIAA1211LQ6NV74 962 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 CD200R1LQ6Q8B3 271 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 PAMR1Q6UXH9 720 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 QSOX2Q6ZRP7 698 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 LAPTM4BQ86VI4 370 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 MTERF3Q96E29 417 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 SGK2Q9HBY8 427 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 GPBP1L1Q9HC44 474 aaPredicted RBP16.92■□□□□ 0.3
NUP54-205ENST00000507257 NUP50Q9UKX7 468 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 RAB23Q9ULC3 237 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 GSTK1Q9Y2Q3 226 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 PPIL1Q9Y3C6 166 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 PCDHB7Q9Y5E2 793 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 TMEM129A0AVI4 362 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 HEPACAM2A8MVW5 462 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 E7EQ34 232 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 FFAR1O14842 300 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 LYRM1O43325 122 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 FHP07954 510 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 ZNF8P17098 575 aaPredicted RBP16.92■□□□□ 0.3
NUP54-205ENST00000507257 CFL1P23528 166 aaKnown RBP16.92■□□□□ 0.3
NUP54-205ENST00000507257 MAN2A2P49641 1150 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 XKP51811 444 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 ARPP19P56211 112 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 BTG1P62324 171 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 ZNF763Q0D2J5 394 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 C22orf42Q6IC83 251 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 RETSATQ6NUM9 610 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 ANGPTL8Q6UXH0 198 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 TPRG1Q6ZUI0 275 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 ANKS3Q6ZW76 656 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 USP30Q70CQ3 517 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 ARMCX6Q7L4S7 300 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 VRK3Q8IV63 474 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.92■□□□□ 0.3
NUP54-205ENST00000507257 OR52I1Q8NGK6 324 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 HUS1BQ8NHY5 278 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 ZBED6CLQ96FA7 236 aaPredicted RBP16.92■□□□□ 0.3
NUP54-205ENST00000507257 TEFMQ96QE5 360 aaKnown RBP16.92■□□□□ 0.3
NUP54-205ENST00000507257 COQ7Q99807 217 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 TMEM43Q9BTV4 400 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 ATG10Q9H0Y0 220 aa16.92■□□□□ 0.3
NUP54-205ENST00000507257 C12orf10Q9HB07 376 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms