RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 PRTGQ2VWP7 1150 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 MINDY4Q4G0A6 757 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 ZNF658BQ4V348 819 aaPredicted RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 BEX5Q5H9J7 111 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 ASPHD2Q6ICH7 369 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 TMEM220Q6QAJ8 160 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 DOK3Q7L591 496 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 ARCQ7LC44 396 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 ZNF572Q7Z3I7 529 aaPredicted RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 DTX2Q86UW9 622 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 ZDHHC17Q8IUH5 632 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 SNX31Q8N9S9 440 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 PSD4Q8NDX1 1056 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 RAB3IL1Q8TBN0 382 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 SLC44A1Q8WWI5 657 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 FAF2Q96CS3 445 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 C1GALT1C1Q96EU7 318 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 BTBD9Q96Q07 612 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 VPS35Q96QK1 796 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 SERINC2Q96SA4 455 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 TIMP4Q99727 224 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 CITED1Q99966 193 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 RBM4BQ9BQ04 359 aaKnown RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 TUBGCP2Q9BSJ2 902 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 TRAF4Q9BUZ4 470 aaPredicted RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 SFXN3Q9BWM7 321 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 CALHM2Q9HA72 323 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 MKKSQ9NPJ1 570 aaPredicted RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 SEMA4BQ9NPR2 832 aaPredicted RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 ZNHIT6Q9NWK9 470 aaKnown RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 DTX4Q9Y2E6 619 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 NCKAP5O14513 1909 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 LOC105369274A0A096LPK9 316 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 LOC102723532A0A0G2JNH3 316 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 C1orf232A0A0U1RR37 186 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 SLC5A10A0PJK1 596 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 PABPN1LA6NDY0 278 aaKnown RBP4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 SMAD9O15198 467 aaKnown RBP4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 FOXS1O43638 330 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 SRPX2O60687 465 aaPredicted RBP4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 RCBTB2O95199 551 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 SCGB1D2O95969 90 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 BMP15O95972 392 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 CYC1P08574 325 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 RFPL3SP0C7P2 107 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 NR2F2P24468 414 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 PTPN7P35236 360 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 PCK1P35558 622 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 CD79BP40259 229 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 PTPN9P43378 593 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 SLCO1A2P46721 670 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 CPA2P48052 419 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 SLC6A12P48065 614 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 SLC26A5P58743 744 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 MAXP61244 160 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 PLGLB1Q02325 96 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 CRYZQ08257 329 aaKnown RBP4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 FAM189A2Q15884 450 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 NRF1Q16656 503 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 SYT16Q17RD7 645 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 ATP13A5Q4VNC0 1218 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 ANKRD20A8PQ5CZ79 823 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 FRMPD2BQ6IN97 320 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 RRAGAQ7L523 313 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 OR4N4Q8N0Y3 316 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 CYP4Z2PQ8N1L4 340 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 MYO1HQ8N1T3 1032 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 SYT14Q8NB59 555 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 OR2L2Q8NH16 312 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 NEUROG1Q92886 237 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 ZC3HAV1LQ96H79 300 aaKnown RBP4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 ZNF599Q96NL3 588 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 GNRHR2Q96P88 292 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 OR14A2Q96R54 314 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 LRRC27Q9C0I9 530 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 PIGMQ9H3S5 423 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 ACKR4Q9NPB9 350 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 PKD2L2Q9NZM6 624 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 FAM30AQ9NZY2 134 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 DNPEPQ9ULA0 475 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 PCDHA3Q9Y5H8 950 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 PCDHA13Q9Y5I0 950 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 HEBP2Q9Y5Z4 205 aa4.72□□□□□ -1.65
SBDSP1-204ENST00000453858 NINQ8N4C6 2090 aa4.71□□□□□ -1.65
SBDSP1-204ENST00000453858 ARHGAP42A6NI28 874 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 PES1O00541 588 aaKnown RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 MED7O43513 233 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 CNR1P21554 472 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 COMTP21964 271 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 MGAT1P26572 445 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 HSPA9P38646 679 aaKnown RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 NR4A2P43354 598 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 NUDT6P53370 316 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 TAS2R50P59544 299 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 HMGN5P82970 282 aaKnown RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 MPP1Q00013 466 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 GCNT1Q02742 428 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 PLP2Q04941 152 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 GALNT2Q10471 571 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms