RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 NEK5Q6P3R8 708 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 NCEH1Q6PIU2 408 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 TRIM65Q6PJ69 517 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 GFRALQ6UXV0 394 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 SLC26A9Q7LBE3 791 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 SDCCAG8Q86SQ7 713 aaPredicted RBP3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 SETD3Q86TU7 594 aaPredicted RBP3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 TAC4Q86UU9 113 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 LRRTM4Q86VH4 590 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 TRIM69Q86WT6 500 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 TMEM219Q86XT9 240 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 MMAAQ8IVH4 418 aaKnown RBP3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 DSELQ8IZU8 1212 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 MLKLQ8NB16 471 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 TMEM35BQ8NCS4 154 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 ZCCHC10Q8TBK6 192 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 ZNF564Q8TBZ8 553 aaPredicted RBP3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 C17orf50Q8WW18 174 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 ZNF606Q8WXB4 792 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 NDRG1Q92597 394 aaKnown RBP3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 ARHGEF26Q96DR7 871 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 PPP1R13BQ96KQ4 1090 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 PRICKLE1Q96MT3 831 aaPredicted RBP3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 RPRD1AQ96P16 312 aaPredicted RBP3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 BBS4Q96RK4 519 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 CRACR2AQ9BSW2 395 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 HEMGNQ9BXL5 484 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 HOMER3Q9NSC5 361 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 IRAK4Q9NWZ3 460 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 VPS28Q9UK41 221 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 CLEC4EQ9ULY5 219 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 NAALADL1Q9UQQ1 740 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 FAM96BQ9Y3D0 163 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 ADGRG4Q8IZF6 3080 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 SHANK1Q9Y566 2161 aa3.99□□□□□ -1.77
GTF3C3-207ENST00000451088 JMJD1CQ15652 2540 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 SYNJ2BP-COX16A0A087WUM0 186 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 GOLGA6L7A0A1B0GV03 622 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 NEMP2A6NFY4 417 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 C16orf97H3BN30 126 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 MCF2LO15068 1137 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 TPD52L2O43399 206 aaKnown RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 LATO43561 262 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 FGF17O60258 216 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 KIF5CO60282 957 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 DAB1O75553 588 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 IGLV3-25P01717 112 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 ATP1A1P05023 1023 aaKnown RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 FYNP06241 537 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 IGHV4-34P06331 123 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 CFC1BP0CG36 223 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 CFC1P0CG37 223 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 G6PDP11413 515 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 CDH1P12830 882 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 PDGFRAP16234 1089 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 EPHA8P29322 1005 aaPredicted RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 RBMS1P29558 406 aaKnown RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 AKT2P31751 481 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 RXRGP48443 463 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 SGSHP51688 502 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 CRIP2P52943 208 aaPredicted RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 NME3Q13232 169 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 CTF1Q16619 201 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 C2orf68Q2NKX9 166 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 EIF2S3LQ2VIR3 472 aaKnown RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 SLC25A52Q3SY17 297 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 FHL5Q5TD97 284 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 SYPL2Q5VXT5 272 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 OR6B2Q6IFH4 312 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 METTL2BQ6P1Q9 378 aaKnown RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 ODF3L1Q8IXM7 274 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 C1orf87Q8N0U7 546 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 CCAR2Q8N163 923 aaKnown RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 STK40Q8N2I9 435 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 ZBTB2Q8N680 514 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 SAP25Q8TEE9 199 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 SSC4DQ8WTU2 575 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 SLC20A1Q8WUM9 679 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 SHC3Q92529 594 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 ABTB1Q969K4 478 aaPredicted RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 MOCOSQ96EN8 888 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 SGF29Q96ES7 293 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 PGAP3Q96FM1 320 aaPredicted RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 METTL2AQ96IZ6 378 aaKnown RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 C1orf74Q96LT6 269 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 FEM1AQ9BSK4 669 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 FUZQ9BT04 418 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 CSTL1Q9H114 145 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 NEUROG2Q9H2A3 272 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 BPIFA1Q9NP55 256 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 MMP25Q9NPA2 562 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 COX16Q9P0S2 106 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 CYTH4Q9UIA0 394 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 ANAPC2Q9UJX6 822 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 FBXO9Q9UK97 447 aaPredicted RBP3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 BLOC1S6Q9UL45 172 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 HPCAL4Q9UM19 191 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 HS3ST2Q9Y278 367 aa3.98□□□□□ -1.77
GTF3C3-207ENST00000451088 MYO7BQ6PIF6 2116 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms