RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 APRTP07741 180 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 SLC2A2P11168 524 aaPredicted RBP4.51□□□□□ -1.69
LINC00397-202ENST00000606785 CDK4P11802 303 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 PLA2G2AP14555 144 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 GNSP15586 552 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 PRPHP41219 470 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 ALDH3B1P43353 468 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 SARNPP82979 210 aaKnown RBP4.51□□□□□ -1.69
LINC00397-202ENST00000606785 MFGE8Q08431 387 aaPredicted RBP4.51□□□□□ -1.69
LINC00397-202ENST00000606785 ELP6Q0PNE2 266 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 HSPA14Q0VDF9 509 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 MEF2DQ14814 521 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 FILIP1LQ4L180 1135 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 GPAT3Q53EU6 434 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 MPPE1Q53F39 396 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 IL23RQ5VWK5 629 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 HIST2H2AA3Q6FI13 130 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 SPSB3Q6PJ21 355 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 RBMS3Q6XE24 437 aaKnown RBP4.51□□□□□ -1.69
LINC00397-202ENST00000606785 C9orf139Q6ZV77 190 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 RFPL4BQ6ZWI9 263 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 TRMT1LQ7Z2T5 733 aaKnown RBP4.51□□□□□ -1.69
LINC00397-202ENST00000606785 BNIPLQ7Z465 357 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 ELMOD1Q8N336 334 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 FBXO30Q8TB52 745 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 TM9SF4Q92544 642 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 DYRK2Q92630 601 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 FCGR1BQ92637 280 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 CASP10Q92851 521 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 RPGRIP1Q96KN7 1286 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 LYZL4Q96KX0 146 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 CXorf58Q96LI9 332 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 LURAP1Q96LR2 239 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 MEIS3Q99687 375 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 CBWD1Q9BRT8 395 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 FUNDC2Q9BWH2 189 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 CARD6Q9BX69 1037 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 IQCGQ9H095 443 aaKnown RBP4.51□□□□□ -1.69
LINC00397-202ENST00000606785 RIBC2Q9H4K1 309 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 HPS4Q9NQG7 708 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 AATFQ9NY61 560 aaKnown RBP eCLIP4.51□□□□□ -1.69
LINC00397-202ENST00000606785 TMOD2Q9NZR1 351 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.51□□□□□ -1.69
LINC00397-202ENST00000606785 MRTO4Q9UKD2 239 aaKnown RBP4.51□□□□□ -1.69
LINC00397-202ENST00000606785 OR1A2Q9Y585 309 aa4.51□□□□□ -1.69
LINC00397-202ENST00000606785 DDX49Q9Y6V7 483 aaKnown RBP4.51□□□□□ -1.69
LINC00397-202ENST00000606785 A0A087WZ39 114 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 DENND3A2RUS2 1198 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 NKX6-3A6NJ46 265 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 FAM25EA8MYX2 175 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 P2RX6O15547 441 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 SEC24AO95486 1093 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 PAK4O96013 591 aaPredicted RBP4.5□□□□□ -1.69
LINC00397-202ENST00000606785 VTNP04004 478 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 TPBGLP0DKB5 382 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 PRKAR1AP10644 381 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 AMD1P17707 334 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 AADACP22760 399 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 HOXD10P28358 340 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 HLA-FP30511 346 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 OR3A2P47893 321 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 NLRP11P59045 1033 aaKnown RBP4.5□□□□□ -1.69
LINC00397-202ENST00000606785 NANOS2P60321 138 aaKnown RBP4.5□□□□□ -1.69
LINC00397-202ENST00000606785 MYBPC1Q00872 1141 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 TRDNQ13061 729 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 OR1C1Q15619 314 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 SLC25A47Q6Q0C1 308 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 TRPT1Q86TN4 253 aaKnown RBP4.5□□□□□ -1.69
LINC00397-202ENST00000606785 YRDCQ86U90 279 aaKnown RBP4.5□□□□□ -1.69
LINC00397-202ENST00000606785 CIARTQ8N365 385 aaPredicted RBP4.5□□□□□ -1.69
LINC00397-202ENST00000606785 STPG4Q8N801 248 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 BCORP1Q8N888 145 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 NIPA2Q8N8Q9 360 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 CCDC197Q8NCU1 140 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 GPRC5AQ8NFJ5 357 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 SMPDL3AQ92484 453 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 RAB7BQ96AH8 199 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 SENP5Q96HI0 755 aaPredicted RBP4.5□□□□□ -1.69
LINC00397-202ENST00000606785 NKX3-1Q99801 234 aaPredicted RBP4.5□□□□□ -1.69
LINC00397-202ENST00000606785 CRACR2AQ9BSW2 395 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 TDRD1Q9BXT4 1180 aaKnown RBP4.5□□□□□ -1.69
LINC00397-202ENST00000606785 NACA2Q9H009 215 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 SLC26A1Q9H2B4 701 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 CENPMQ9NSP4 180 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 ZFP57Q9NU63 452 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 VPS54Q9P1Q0 977 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 RABL2AQ9UBK7 228 aaPredicted RBP4.5□□□□□ -1.69
LINC00397-202ENST00000606785 MGAT4BQ9UQ53 548 aa4.5□□□□□ -1.69
LINC00397-202ENST00000606785 KIAA1210Q9ULL0 1709 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 TMCO5BA8MYB1 307 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 H0YHG0 523 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 CCSO14618 274 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 IKBKBO14920 756 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ARPC1BO15143 372 aaKnown RBP4.49□□□□□ -1.69
LINC00397-202ENST00000606785 CHADO15335 359 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ECE2O60344 883 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 BBOX1O75936 387 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 KIAA0754O94854 1291 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 UMODP07911 640 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms