RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ADAM29Q9UKF5 820 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 ATG4BQ9Y4P1 393 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 CCL27Q9Y4X3 112 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 CLDN16Q9Y5I7 305 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 DNAJC15Q9Y5T4 150 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 IGKV3D-11A0A0A0MRZ8 115 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 IGHV1-45A0A0A0MS14 117 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 IGHV3-20A0A0C4DH32 117 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 A0A1W2PR48 441 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 WASHC1A8K0Z3 465 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 HMGB1P1B2RPK0 211 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 TMEM114B3SHH9 223 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 TGFBR3LH3BV60 316 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 CLDN4O14493 209 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 CTNSO60931 367 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 LYPLA1O75608 230 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 HPP00738 406 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 FAM87AP0C7U9 286 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 COX6A1P12074 109 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 CPN2P22792 545 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 GRK2P25098 689 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 CCL11P51671 97 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 RRADP55042 308 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 POLE2P56282 527 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 HSD17B7P56937 341 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 ABCE1P61221 599 aaKnown RBP11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 RAE1P78406 368 aaKnown RBP11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 EEF1A2Q05639 463 aaKnown RBP11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 BTKQ06187 659 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 Q0VFX4 171 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 PCOLCEQ15113 449 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 SH2D4BQ5SQS7 431 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 CCNYL2Q5T2Q4 361 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 C18orf63Q68DL7 685 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 CYP20A1Q6UW02 462 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 RNF165Q6ZSG1 346 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 Q6ZSR9 355 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 PAGE2Q7Z2X7 111 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 CPEB2Q7Z5Q1 589 aaKnown RBP11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 C1orf52Q8N6N3 182 aaKnown RBP11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 GOLGA6L1Q8N7Z2 621 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 AGR3Q8TD06 166 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 UCN3Q969E3 161 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 C11orf24Q96F05 449 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 VPS50Q96JG6 964 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 IMMP1LQ96LU5 166 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 WDR77Q9BQA1 342 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 ZNF700Q9H0M5 742 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 ATP13A2Q9NQ11 1180 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 PRTFDC1Q9NRG1 225 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 LYARQ9NX58 379 aaKnown RBP11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 FIS1Q9Y3D6 152 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 MMACHCQ9Y4U1 282 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 PTGDR2Q9Y5Y4 395 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 SPACA6W5XKT8 324 aa11.22□□□□□ -0.61
RABGGTA-218ENST00000560777 NUP210LQ5VU65 1888 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 NSG1A0A0A6YYJ2 146 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 TCRBV16S1A1N1A0A5B0 115 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 CEACAM4O75871 244 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 HSPA4LO95757 839 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 LINC00032P0C843 101 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 NEFHP12036 1026 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 SLC1A6P48664 564 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 SOX8P57073 446 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 BST1Q10588 318 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 AIMP2Q13155 320 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 SLC13A2Q13183 592 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 STX3Q13277 289 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 SFT2D3Q587I9 215 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 SPDYAQ5MJ70 313 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 HOMEZQ8IX15 550 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 PARP9Q8IXQ6 854 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 CLEC1AQ8NC01 280 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 OR2T11Q8NH01 316 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 ANKRD9Q96BM1 317 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 TM4SF18Q96CE8 201 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 WBP1Q96G27 269 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 UBL7Q96S82 380 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 SORT1Q99523 831 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 ARHGAP9Q9BRR9 750 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 RPF2Q9H7B2 306 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 ZNF160Q9HCG1 818 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 SIRT5Q9NXA8 310 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 C19orf25Q9UFG5 118 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 PHF11Q9UIL8 331 aa11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 MRPS33Q9Y291 106 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-218ENST00000560777 MYOCOSA0A1B0GUC4 107 aa11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 ARHGAP10A1A4S6 786 aa11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 BLACEA4D250 179 aa11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 A6NL46 340 aa11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 NPIPB8E9PQR5 432 aa11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 SLC28A1O00337 649 aa11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 PGRMC2O15173 223 aa11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 LDB3O75112 727 aa11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 PRKRAO75569 313 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 RSL1D1O76021 490 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 SNUPNO95149 360 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-218ENST00000560777 CHEK2O96017 543 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms