RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SYNDIG1LA6NDD5 238 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 MYO1DO94832 1006 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 GSTA1P08263 222 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 TAC1P20366 129 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 HERVK_113P63132 956 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 C10orf62Q5T681 223 aaPredicted RBP18.99■□□□□ 0.63
GTF3A-202ENST00000419181 FRG2Q64ET8 278 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 TDRPQ86YL5 185 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 ZCCHC7Q8N3Z6 543 aaKnown RBP18.99■□□□□ 0.63
GTF3A-202ENST00000419181 APCDD1LQ8NCL9 501 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 B3GNT7Q8NFL0 401 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 FRG2BQ96QU4 278 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 ERVK-6Q9BXR3 956 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.99■□□□□ 0.63
GTF3A-202ENST00000419181 ADAP2Q9NPF8 381 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 PNO1Q9NRX1 252 aaKnown RBP18.99■□□□□ 0.63
GTF3A-202ENST00000419181 AGPAT4Q9NRZ5 378 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 FBXW2Q9UKT8 454 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 HIVEP3Q5T1R4 2406 aa18.99■□□□□ 0.63
GTF3A-202ENST00000419181 HECTD1Q9ULT8 2610 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 A0A1W2PPM1 405 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 BLACEA4D250 179 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 PPP6CO00743 305 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 DLX3O60479 287 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 OTCP00480 354 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 BSGP35613 385 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 CDH13P55290 713 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 SRSF1Q07955 248 aaKnown RBP eCLIP18.98■□□□□ 0.63
GTF3A-202ENST00000419181 SLAMF1Q13291 335 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 MRPL49Q13405 166 aaKnown RBP18.98■□□□□ 0.63
GTF3A-202ENST00000419181 RASA2Q15283 850 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 INAQ16352 499 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 SH2D5Q6ZV89 423 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 MILR1Q7Z6M3 343 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 ARMC10Q8N2F6 343 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 OR4F6Q8NGB9 312 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 GRHL3Q8TE85 626 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 MS4A12Q9NXJ0 267 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 ABI3Q9P2A4 366 aa18.98■□□□□ 0.63
GTF3A-202ENST00000419181 COL12A1Q99715 3063 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 DOPEY2Q9Y3R5 2298 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 FOXO6A8MYZ6 492 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 PRAMEF2O60811 474 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 SEMA3DO95025 777 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 CBX6O95503 412 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 CPN2P22792 545 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 ATP5F1P24539 256 aaPredicted RBP18.97■□□□□ 0.63
GTF3A-202ENST00000419181 SLCO1A2P46721 670 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 GPR143P51810 404 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 VSNL1P62760 191 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 TUBA3CQ13748 450 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 NR6A1Q15406 480 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 ELAVL1Q15717 326 aaKnown RBP18.97■□□□□ 0.63
GTF3A-202ENST00000419181 ZNF678Q5SXM1 525 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 LETMD1Q6P1Q0 360 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 TUBA3EQ6PEY2 450 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 RPS19BP1Q86WX3 136 aaKnown RBP18.97■□□□□ 0.63
GTF3A-202ENST00000419181 FAM26EQ8N5C1 309 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 EPS8L3Q8TE67 593 aaKnown RBP18.97■□□□□ 0.63
GTF3A-202ENST00000419181 FAR1Q8WVX9 515 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 TMEM237Q96Q45 408 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 SERPINI1Q99574 410 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 CDCP1Q9H5V8 836 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 DDX31Q9H8H2 851 aaKnown RBP18.97■□□□□ 0.63
GTF3A-202ENST00000419181 VTI1BQ9UEU0 232 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 DCDC2Q9UHG0 476 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 PHF11Q9UIL8 331 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 ZNF225Q9UK10 706 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 SVILO95425 2214 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 POLEQ07864 2286 aa18.97■□□□□ 0.63
GTF3A-202ENST00000419181 A0A0A6YYD5 115 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 GABRR3A8MPY1 467 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 LDB3O75112 727 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 EEDO75530 441 aaKnown RBP18.96■□□□□ 0.63
GTF3A-202ENST00000419181 TSPAN8P19075 237 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 HSD17B3P37058 310 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 CD96P40200 585 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 CLCN2P51788 898 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 HNRNPH2P55795 449 aaKnown RBP18.96■□□□□ 0.63
GTF3A-202ENST00000419181 CLCQ05315 142 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 STX4Q12846 297 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 IFT88Q13099 833 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 UNC50Q53HI1 259 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 TTC19Q6DKK2 380 aaPredicted RBP18.96■□□□□ 0.63
GTF3A-202ENST00000419181 MRM1Q6IN84 353 aaKnown RBP18.96■□□□□ 0.63
GTF3A-202ENST00000419181 FAM180AQ6UWF9 173 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 GPR180Q86V85 440 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 MDS2Q8NDY4 140 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 MYRIPQ8NFW9 859 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 SUN3Q8TAQ9 357 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 TRPC4APQ8TEL6 797 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 ANKRD9Q96BM1 317 aaPredicted RBP18.96■□□□□ 0.63
GTF3A-202ENST00000419181 MTFMTQ96DP5 389 aaKnown RBP18.96■□□□□ 0.63
GTF3A-202ENST00000419181 VMP1Q96GC9 406 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 TAAR6Q96RI8 345 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 UTP23Q9BRU9 249 aaKnown RBP18.96■□□□□ 0.63
GTF3A-202ENST00000419181 ALOXE3Q9BYJ1 711 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 DEFB126Q9BYW3 111 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 ANKRD10Q9NXR5 420 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 ZNF223Q9UK11 482 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms